Parental gene:

EIF3J, ENSPPYG00000006431

Aliases:None
Description:eukaryotic translation initiation factor 3 subunit J [Source:RefSeq peptide;Acc:NP_001126147]
Organism:Orangutan (Pongo abelii)
Coordinates:15:41019766..41043694(+)


>ENSPPYG00000006431
ATGGCGGCGGCGGCGGCGGCGGCGGCGGGGGACTCGGACTCCTGGGACGCCGACGCGTTCTCCGTGGAAGACCCAGTGCG
GAAGGTGGGGGGCGGCGGCACTGCCGGCGGGGACCGCTGGGAAGGCGAGGACGAGGACGAGGACGTCAAGGATAACTGGG
ATGACGATGATGATGAAAAAAAAGAGGAAGCAGAAGTAAAACCAGAGGTAAAAATTTCAGAAAAGAAAAAAATAGCAGAG
AAGATAAAAGAGAAAGAACGGCAACAGAAGAAAAGGCAAGAAGAAATTAAAAAGAGGTTAGAAGAACCTGAAGAACCTAA
AGTGCTAACACCAGAAGAACAATTAGCAGATAAACTTCGGCTAAAGAAATTACAGGAAGAGTCAGACCTCGAATTAGCAA
AGGAAACTTTTGGTGTTAATAATACAGTTTATGGAATAGATGCTATGAACCCATCTTCAAGAGATGACTTTACAGAGTTT
GGAAAGTTACTAAAAGATAAAATTACACAATATGAAAAGTCACTATATTATGCCAGTTTTTTGGAAGTCTTAGTTCGAGA
TGTGTGTATTTCATGTAATGTTTCTGGGACCAAAGGTTTTTGTGTGTTTATGAGGGTTGCTGTACCAGATAAGATGGCAC
ATAAACAAAGCAAAGCCAAAAAGAAGAAGAAAGGTGTGGTTCCTGGAGGGGGATTAAAAGCCACCATGAAAGATGATCTG
GCAGATTATGGTGGTTATGATGGAGGATATGTACAAGACTATGAAGACTTCATGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 11 .78 RPM
SRP007412_cerebellum 5 .96 RPM
SRP007412_heart 11 .71 RPM
SRP007412_kidney 11 .70 RPM
SRP007412_liver 8 .14 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000002412 possible_ortholog 1 retrogene
retro_cjac_589,
Dipodomys ordii ENSDORG00000008339 ortholog_one2one 7 retrogenes
retro_dord_208, retro_dord_364, retro_dord_451, retro_dord_470, retro_dord_633, retro_dord_738, retro_dord_746,
Macropus eugenii ENSMEUG00000010372 ortholog_one2one 1 retrogene
retro_meug_256,
Monodelphis domestica ENSMODG00000017696 possible_ortholog 1 retrogene
retro_mdom_141,
Mus musculus ENSMUSG00000027236 ortholog_one2many 1 retrogene
retro_mmus_18,
Nomascus leucogenys ENSNLEG00000005568 possible_ortholog 1 retrogene
retro_nleu_2848,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3429 60.27 86.05
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Download FASTA sequences of all ENSPPYG00000006431 retrocopies