Parental gene:

SETD8, ENSPPYG00000005085

Aliases:None
Description:SET domain containing (lysine methyltransferase) 8 [Source:HGNC Symbol;Acc:29489]
Organism:Orangutan (Pongo abelii)
Coordinates:12:125756115..125784258(+)


>ENSPPYG00000005085
ATGGCTAGAGAGAACGTATTTACCGGGCAGTCAAAGATCTATTCCTACATGAGCCCGAACAAATGCTCTGGAATGCGTTT
CCCCCTTCAGGAAGAGAACTCAGTTGCACATCACGAAGTCAAATGCCAGGGGAAACCATTAGCCGGAATCTACAGGAAAC
GAGAAGAGAAAAGAAATGCTGGGAACGCAGTACGGAGTGCCATGAAGTCCGAGGAACAGAAGATCAAAGACGCCAGGAGA
GGTCCCCTGGCACCTTTTCCAAACCAAAAATCTGAAGCAGCAGAACCTCCAAAAACTCCACCCTCATCTTGTGATTCCAC
CAATGCAGCCATCGCCAAGCAAGCCCTGAAAAAGCCCATCAAGGGCAAACAGGCCCCCCGAAAAAAAGCTCAAGGAAAAA
CGCAACAGAATCGCAAACTTACGGATTTCTACCCTGTCCGAAGGAGCTCCAGGAAGAGCAAAGCCGAGTTGCAGTCTGAA
GAAAGGAAAAGAATAGATGAATTGATTGAAAGTGGGAAGGAAGAAGGAATGAAGATTGACCTCATCGATGGCAAAGGCAG
GGGTGTGATTGCCACCAAGCAGTTCTCCCGGGGTGACTTTGTGGTGGAATACCACGGGGACCTCATCGAGATCACCGACG
CCAAGAAACGGGAGGCTCTGTACGCACAGGACCCTTCCACGGGCTGCTACATGTACTATTTTCAGTATCTGAGCAAAACC
TACTGCGTGGATGCAACTAGAGAGACAAATCGCCTGGGAAGACTGATCAATCACAGCAAATGTGGGAACTGCCAAACCAA
ACTGCACGACATCGACGGCGTACCTCACCTCATCCTCATTGCCTCCCGAGACATCGCGGCTGGGGAGGAGCTCCTGTATG
ACTATGGGGACCGCAGCAAGGCTTCCATTGAAGCCCACCCGTGGCTGAAGCATTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 22 .50 RPM
SRP007412_cerebellum 34 .66 RPM
SRP007412_heart 14 .06 RPM
SRP007412_kidney 35 .30 RPM
SRP007412_liver 14 .96 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000183955 ortholog_one2one 2 retrogenes
retro_hsap_2294, retro_hsap_4320,
Macaca mulatta ENSMMUG00000013514 ortholog_one2one 1 retrogene
retro_mmul_1579,
Mus musculus ENSMUSG00000049327 ortholog_one2one 2 retrogenes
retro_mmus_1459, retro_mmus_3478,
Otolemur garnettii ENSOGAG00000031093 ortholog_one2one 1 retrogene
retro_ogar_1217,
Pan troglodytes ENSPTRG00000005598 ortholog_one2one 1 retrogene
retro_ptro_1622,
Rattus norvegicus ENSRNOG00000001062 ortholog_one2many 4 retrogenes
retro_rnor_1551, retro_rnor_2837, retro_rnor_38, retro_rnor_679,
Sarcophilus harrisii ENSSHAG00000015376 ortholog_one2many 2 retrogenes
retro_shar_110, retro_shar_115,
Tursiops truncatus ENSTTRG00000015884 ortholog_one2one 1 retrogene
retro_ttru_1301,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1347 72.28 63.02
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2. retro_pabe_1381 72.10 99.04
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Download FASTA sequences of all ENSPPYG00000005085 retrocopies