Parental gene:

GPBP1, ENSOGAG00000013991

Aliases:None
Description:GC-rich promoter binding protein 1 [Source:HGNC Symbol;Acc:29520]
Organism:Bushbaby (Otolemur garnettii)
Coordinates:GL873524.1:40177251..40207238(-)


>ENSOGAG00000013991
CAGTCGTCATTGAATTTTGAGAAGCATTCTGAAAACTTTTCATGGACAGAAAACCGATATGATGTGAATCGTCGACGACA
CAACTCTTCAGATGGCTTTGATTCTGGTATTGGACGTCCTAATGGAGCAAATAAAGGTAACTTTGGAAGGAAGGAAAAAA
ATGGATGGCGTACACATGGAAGAAATGGTACTGAAAACATAAATCATCGAGGGGGATACCATGGTGGAAGTTCCCGTTCT
CGTAGCAGTATTTTCCATTCTGGAAAAAGCCAAGGATTACATGAAAACAACATACCTGACAATGAAACTGGGAGGAAAGA
AGATAAGAGAGAACGCAAACAGTTTGAGGCTGAGGATTTTCCATCTTTAAATCCTGAATATGAGAGAGAACCAAATCAGA
ATAAATCTTTAGCTGCAGGTGTATGGGAATATCCTCCGAATCCTAAATCTAGAGCTCCAAGGATGCTGGTCATTAAGAAA
GGTAATACAAAAGACTTACAGCTATCTGGATTCCCAGTAGTAGGAAATCTTCAGTCACAGCCAGTTAAGAACGGAACTGG
TCCCAGTGTTTATAAAGGTTTAGTCCCTAAACCTGCTGCTCCACCTACAAAACCCACACAATGGAAAAGCCAAACTAAAG
AAAATAAAGTTGGGACTTCTTTCCCGCATGAGTCTACATACGGTGTTGGCAACTTTAATGCTTTTAAATCAACTGCCAAG
AATTTTAGTCCATCAGCTAATTCAGTGAAAGAGTGTAATCGCTCAAATTCCTCTTCACCTGTTGACAAACTTAATCAGCA
GCCTCGTCTAACCAAACTGACACGAATGCGCACTGATAAGAAGAGTGAATTTTTGAAAGCATTGAAAAGGGACAGAGTAG
AAGAGGAACATGAAGATGAAAGCCATGCTGGCTCGGAGAAGGATGACGACTCATTTAATTTACATAACAGCAATAGCACT
CACCAAGAAAGGGATATAAACCGGAACTTTGATGAAAATGAAATTCCACAAGAGAATGGCAATGCCTCGGTGATTTCCCA
ACAAATCATTCGTTCTTCAACCTTCCCACAAACTGATGTTCTTTCAAGTTCACTTGAGGCAGAACACAGATTGTTGAAGG
AGATGGGCTGGCAGGAAGACAGTGAAAATGATGAAACATGTGCTCCTTTAACTGAGGATGAAATGAGAGAATTCCAAGTT
ATTAGTGAACAGTTACAGAAGAATGGTCTGAGAAAAAATGGTATTTTGAAAAATGGCCTGATCTGTGACTTCAAGTTTGG
ACCTTGGAAAAACAGCACTTTCAAACCCACAATTGAGAATGATGACACAGAGACAAGTAGCAGTGACACATCGGATGACG
ACGATGTGTGA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000015104 ortholog_one2one 1 retrogene
retro_cjac_3961,
Microcebus murinus ENSMICG00000014678 ortholog_one2one 1 retrogene
retro_mmur_1198,
Myotis lucifugus ENSMLUG00000007462 ortholog_one2many 1 retrogene
retro_mluc_155,
Monodelphis domestica ENSMODG00000019540 ortholog_one2many 1 retrogene
retro_mdom_283,
Otolemur garnettii ENSOGAG00000004134 within_species_paralog 1 retrogene
retro_ogar_1859,
Ictidomys tridecemlineatus ENSSTOG00000003057 ortholog_one2one 1 retrogene
retro_itri_1678,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogar_1077 92.45 69.74
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Download FASTA sequences of all ENSOGAG00000013991 retrocopies