Parental gene:

PTCD2, ENSOGAG00000008390

Aliases:None
Description:pentatricopeptide repeat domain 2 [Source:HGNC Symbol;Acc:25734]
Organism:Bushbaby (Otolemur garnettii)
Coordinates:GL873536.1:6725971..6765643(+)


>ENSOGAG00000008390
ACGGTCCGGGACAGTATGGCTACCTCGTTTAGGCCCTCGGGACAAGGTCTGCGGCAGGTGCTACGTATCTCTTTATATTC
CGGGACAGGAGGCTCGGCCTCCCACTGTTGCCGCTGCCCTCTTGGAGCTAGAAGATACCTACTTACCGATAATATTATAA
AATTAAAAGAATTTCAGCATAACAAGGTGACTGTTGCCCATAATCTTCCTGGCACCAAAGAAACCTATTTTAAAAAGTGG
GAAGAGAAATTGACCCAGGACAAGCTTATCTTGAAGGAGGAGTTGAGAACGTTGCTTCATTTGTGTGAGTCCCGGGATGA
CATGGAACTGGCTAAACGTGTCATTTATAGGTACCATGCAGAGAACAGAAATTTCACTTTGGGAGAATATAAGTTTGGAC
CACTTTTCATGAGGCTGTGTTATGAGTTGAACCTTGAGGAGTCTGCCCTGGCACTCATCAAAGACCAGAGTTTACGAGGT
TTCTTCTCAGACAGCACATCATACAATATTTTGATGGATATGTTATTTATGAAGGGTGAATATGAAAGTGCTTCAGAAGT
ATTGATAGAGATGAAAAACCAAGATGTGAAGTTCAGCAAAGATACCTACGTCCTTGCTTTTGCAATTTTCTACAAACTGA
ATAGCCCCGAATCTCTCAAAATGTGTACTATGTTAAGAGAAGAAGCTCTGATCAAAGGAGACGTTCTCTCCAGGAGAGCA
TCCTGTTTCGCCGTGGCATTAGCTCTGAATCAGAACCAGGTGGAAAAAGCCACATCCTTTTATTCTCAAATCATGAATCC
AGAAAGCATAGCTTGCGCTAATTTAAAGATTATAATCCATATCCAGTCAAATATGTTGGAAACCCTCATAAAGGAACTAG
CAGATGCTGCAGAAGGAAATGTATCAAGATTTGTGAAAAGACATGTGTTCTCAGAGGAAGTGCTGGCCAAAGTAAGGGAA
AAAGTGAAGGCTATCCCTGCCCTTTTGGACAGATTTGATGAGATCTATGGGAAACTGCACATCACTGGCCACGTCACCAC
TCAGACTTTAGATGACCTGCTCTGCCACATCCCCAAAGACAAGAAATCCCCGATGTTGTTTCTGAACAAGAGGAGAATTA
GCCGGAGGACCCTCCAGCCACTCAACAAGTCCCTGTTGGCTGAGTAA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000016364 ortholog_one2one 1 retrogene
retro_cjac_1598,
Homo sapiens ENSG00000049883 ortholog_one2one 2 retrogenes
retro_hsap_1388, retro_hsap_607,
Gorilla gorilla ENSGGOG00000010695 ortholog_one2one 2 retrogenes
retro_ggor_1077, retro_ggor_534,
Macaca mulatta ENSMMUG00000017908 ortholog_one2one 1 retrogene
retro_mmul_2240,
Nomascus leucogenys ENSNLEG00000004516 ortholog_one2one 2 retrogenes
retro_nleu_2954, retro_nleu_436,
Pan troglodytes ENSPTRG00000016968 ortholog_one2one 2 retrogenes
retro_ptro_447, retro_ptro_952,
Ictidomys tridecemlineatus ENSSTOG00000006596 ortholog_one2one 1 retrogene
retro_itri_1469,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogar_3169 75.00 61.08
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Download FASTA sequences of all ENSOGAG00000008390 retrocopies