Parental gene:

ENSOCUG00000026002

Aliases:None
Description:None
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:10:31383656..31392209(-)


>ENSOCUG00000026002
ATGGCCTCTAAATCTTGGCTGAATTTTTTAGTCTTTCTCTGTGGATCAGCAATAGGATTTTTTTTATGTTCTCAACTGTT
TAGTATTTTGCTGGGAGAACACAGTGACACCCAGCCTAACATTCTTCATAATGACCCTCATGCTAGGCATTCAGATGATA
ATGGACAGAATCATCTAGAAGGACAAATGAACTTCAATGCAGATTCCAGCCAACATAAAGATGAGAACACAGACATCGCT
GAAAACCTCTATCAGAAAGTTAAAATTCTTTGCTGGGTTATGACAGGCCCTCAAAATCTAGAGAAAAAGGCCAGACACGT
CAAAGTAACATGGGCCCAGCGTTGTAATAAAGTGCTGTTTATGAGTTCAGAAGAAAATAAAGACTTCCCTACCGTGGGAT
TAAAAACCAAAGAAGGCAGAGATCAGCTATACTGGAAAACAATTAAAGCTTTTCAGTATGTTCATGACCATTATTTAGAA
GATGCCGATTGGTTTCTGAAAGCTGATGATGATACATATGTCATACTGGACAACTTGAGATGGCTTCTTTCAAAATATGA
CCCTGAAGAACCCATTTACTTCGGGAGAAGATTTAAGCCCTATGTAAAGCAGGGCTACATGAGTGGAGGAGCGGGATATG
TACTAAGCAAAGAAGCCCTACGGAGATTTGTTGATGCATTCAAAACAGACAAATGTACACATAGTTCCTCCATTGAAGAC
TTAGCACTGGGAAGATGCATGGAAATTATAAATGTCCAAGCAGGAGATTCCAGAGATACCACTGGAAAAGAAACTTTTCA
TCCCTTTGTACCGGAACACCACTTAATCAAAGGTTATCTCCCCAGAACCTTTTGGTACTGGAATTATAACTATTATCCTC
CTATAGAGGGTCCAGGTTGCTGTTCTGATCTTGCAGTTTCTTTTCATTATGTTGATTCTACAACTATGTATGAATTAGAA
TACCTCGTTTATCATCTTCGTCCATATGGTTATTTATACAGATACCAACCTGAATTACCTGAAAATATATTAAAGGAAAT
AAGTCAAGCAAACAAAAATGAAGATTCAAAAGTAAAATTAGGAAACCCTTGA

Library Parental gene expression (RPM)
SRP017611_brain 1 .05 RPM
SRP017611_kidney 2 .64 RPM
SRP017611_liver 1 .31 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000225 ortholog_one2many 2 retrogenes
retro_chof_1782, retro_chof_2581,
Dasypus novemcinctus ENSDNOG00000017353 ortholog_one2many 2 retrogenes
retro_dnov_1801, retro_dnov_1905,
Homo sapiens ENSG00000106392 ortholog_one2many 2 retrogenes
retro_hsap_3177, retro_hsap_4065,
Loxodonta africana ENSLAFG00000000063 ortholog_one2many 1 retrogene
retro_lafr_1166,
Myotis lucifugus ENSMLUG00000014789 ortholog_one2many 1 retrogene
retro_mluc_1310,
Macaca mulatta ENSMMUG00000016338 ortholog_one2many 1 retrogene
retro_mmul_2009,
Otolemur garnettii ENSOGAG00000012847 ortholog_one2many 1 retrogene
retro_ogar_855,
Petromyzon marinus ENSPMAG00000001562 ortholog_many2many 1 retrogene
retro_pmar_2,
Pan troglodytes ENSPTRG00000018925 ortholog_one2many 2 retrogenes
retro_ptro_2266, retro_ptro_2755,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_216 100.00 100.00
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Download FASTA sequences of all ENSOCUG00000026002 retrocopies