Parental gene: | UBE2R2, ENSOCUG00000023588 |
| Aliases: | None |
| Description: | Ubiquitin-conjugating enzyme E2 R2 [Source:UniProtKB/Swiss-Prot;Acc:Q29503] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 1:19914019..19992192(-) |
>ENSOCUG00000023588
AGGACTGGGGCCCCGGCCCGCACGGCCGCCGCCGCGATGGCCCAGCAGCAGATGACCAGCTCGCAGAAGGCCCTGATGCT
GGAGCTCAAATCCCTGCAGGAGGAACCGGTGGAGGGCTTCCGGATCACCCTGGTGGATGAGTCCGACCTCTACAACTGGG
AGGTGGCCATCTTCGGACCCCCCAACACCCTCTACGAAGGCGGCTACTTCAAGGCGCATATTAAATTTCCTATTGACTAC
CCATATTCACCACCTACCTTCAGATTCTTGACCAAAATGTGGCACCCCAACATTTATGAGAATGGAGATGTATGCATTTC
GATTCTTCATCCGCCTGTAGATGACCCACAGAGTGGAGAACTACCCTCTGAAAGGTGGAATCCTACTCAGAATGTGAGGA
CTATCCTGTTAAGTGTTATCTCACTGCTTAATGAGCCCAACACCTTCTCCCCAGCCAATGTGGATGCCTCAGTTATGTTC
AGGAAATGGAGGGATAGTAAAGGAAAAGACAAAGAATATGCTGAAATCATTAGGAAACAGGTTTCAGCCACTAAGGCCGA
AGCAGAAAAGGACGGAGTGAAGGTCCCCACAACCTTGGCGGAATATTGCATCAAAACTAAAGTGCCTTCCAATGACAACA
GCTCAGATTTGCTTTATGACGACTTGTACGACGATGACATTGATGATGAAGATGAGGAGGAGGAAGATGCCGACTGTTAT
GATGATGATGATTCTGGAAATGAGGAATCGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 32 .56 RPM |
| SRP017611_kidney | 36 .18 RPM |
| SRP017611_liver | 34 .45 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000031810 | ortholog_one2one | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000007589 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000011574 | possible_ortholog | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000006793 | possible_ortholog | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000000248 | within_species_paralog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000029045 | ortholog_one2one | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000010727 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000005734 | possible_ortholog | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000013265 | possible_ortholog | 7 retrogenes | |
| Tursiops truncatus | ENSTTRG00000010587 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_131 | 75.21 | 95.20 | Please wait, loading  |
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| 2. | retro_ocun_1719 | 60.56 | 56.00 | Please wait, loading |
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| 3. | retro_ocun_1793 | 69.59 | 76.40 | Please wait, loading |
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Download FASTA sequences of all ENSOCUG00000023588 retrocopies