Parental gene:

SUV39H2, ENSOCUG00000015090

Aliases:None
Description:suppressor of variegation 3-9 homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:17287]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:16:46408366..46436166(+)


>ENSOCUG00000015090
ATGGCGGCGGCCGGGGCTGAGGCGCAAGGAGCTTGGTGTGTGCCTTGCCTAGTTTCACTTGATACTCTTCAGGAATTATG
TAGAAAAGAAAAACTCACATGTAAATCGATTGGAATCACCAAAAGGAATCTAAACAATTATGAGGTGGAATACTTGTGTG
ACTACAAGGTAGAAAAGGATATGGAATATTATCTTGTAAAATGGAAAGGATGGCCAGATTCTACAAATACTTGGGAACCT
TTGCAAAATCTCAAGTGCCCATTACTGCTCCAGCAGTTCTCTAATGACAAGCATAATTATTTATCTCAGGTAAAGAAATG
CAAAGCAATAATTCCAAAATACAATAACAAAGCTTTGAAACCTGCTGTTGCTGAGTACATTGTAAAGAAGGCTAAACAGA
GGATAGCTCTGCAGAGATGGCAAGATGAACTCAACAGAAGAAAGAATCATAAAGGAATGATATTTGTTGAAAATACTGTT
GACTTAGAGGGCCCACCTTCTGACTTCTACTACATCAATGAATACAAACCAGCTCCTGGAATCAGCTTAGTAAATGAAGC
TACTTTTGGTTGTTCATGCACAGATTGCTTCTTTGAGAAATGTTGTCCTGCTGAAGCTGGAGTTCTTTTGGCTTATAATA
AAAACCAACAAATTAGAATCCCACCTGGCACCCCCATTTATGAATGCAACTCGAGGTGCCGATGTGGACCTGATTGTCCC
AATAGGATTGTACAAAAAGGCACACAATATTCACTTTGCATCTTTCGAACTAGCAATGGCTGTGGCTGGGGTGTAAAAAC
ACTTGTGAAGATTAAAAGAATGAGTTTTGTCATGGAATATGTTGGAGAGGTGATCACAAGTGAAGAAGCTGAAAGACGTG
GACAGTTCTATGACAACAAAGGAATAACTTATCTCTTTGATCTGGACTATGAATCTGATGAATTCACAGTGGATGCAGCT
CGATATGGAAATGTGTCTCATTTTGTGAATCACAGTTGTGACCCAAATCTTCAGGTGTTCAATGTTTTCATTGATAACCT
TGATACTCGTCTTCCACGAATAGCATTATTTTCTACAAGAACCATAAATGCTGGTGAAGAGCTCACTTTTGATTATCAAA
TGAAAGGTTCTGGAGATATATCTTCAGATTCTATTGATCACAGCCCAGCCAAAAAGAGAGTCAGAACTGTATGCAAATGT
GGAGCTGCAACTTGCAGAGGTTACCTCAACTGA

Library Parental gene expression (RPM)
SRP017611_brain 4 .58 RPM
SRP017611_kidney 3 .04 RPM
SRP017611_liver 1 .54 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000004696 ortholog_one2many 1 retrogene
retro_cfam_574,
Cavia porcellus ENSCPOG00000008492 ortholog_one2one 1 retrogene
retro_cpor_1546,
Homo sapiens ENSG00000152455 ortholog_one2one 1 retrogene
retro_hsap_3482,
Gorilla gorilla ENSGGOG00000028243 ortholog_one2one 1 retrogene
retro_ggor_2348,
Microcebus murinus ENSMICG00000002803 ortholog_one2one 1 retrogene
retro_mmur_340,
Nomascus leucogenys ENSNLEG00000012108 ortholog_one2one 1 retrogene
retro_nleu_2202,
Ochotona princeps ENSOPRG00000009465 ortholog_one2one 1 retrogene
retro_opri_1005,
Pongo abelii ENSPPYG00000002106 ortholog_one2one 1 retrogene
retro_pabe_2877,
Tupaia belangeri ENSTBEG00000006477 ortholog_one2one 4 retrogenes
retro_tbel_2646, retro_tbel_3572, retro_tbel_852, retro_tbel_993,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1408 89.49 80.49
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Download FASTA sequences of all ENSOCUG00000015090 retrocopies