Parental gene:

ENSOCUG00000014589

Aliases:None
Description:None
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:2:68631019..68649003(+)


>ENSOCUG00000014589
ATGCCAGCAGCAACTGTAGATCATAGCCAAAGAATTTGTGAAGTTTGGGCTTGCAACCTGGATGAAGAGATGAAGAAAAT
TCGTCAAGTTATCCGAAAATACAATTACGTTGCTATGGACACTGAGTTTCCAGGTGTGGTTGCAAGACCTATTGGCGAAT
TCAGGAGCAATGCTGACTATCAGTACCAACTGTTGCGGTGTAATGTAGACTTGTTAAAGATAATTCAGCTAGGACTGACC
TTTATGAATGAACAAGGAGAATACCCTCCAGGAACTTCAACTTGGCAGTTTAATTTTAAATTTAATTTGACGGAGGACAT
GTATGCCCAGGACTCCATAGAGCTGCTAACAACATCTGGTATCCAATTTAAAAAACATGAGGAGGAAGGAATTGAGACCC
AGTACTTTGCAGAACTTCTTATGACTTCTGGAGTGGTCCTCTGTGAGGGGGTCAAATGGTTATCATTTCATAGTGGTTAT
GACTTTGGCTATTTAATCAAAATCCTGACAAACTCCAATTTGCCCGAAGAAGAACTTGACTTCTTTGAGATCCTTCGCTT
GTTTTTTCCTGTCATTTATGATGTGAAGTACCTCATGAAGAGCTGCAAAAATCTTAAAGGTGGATTGCAGGAAGTTGCTG
AACAGTTAGAGCTGGAACGGATAGGACCACAGCATCAGGCAGGATCTGATTCATTACTCACAGGAATGGCCTTTTTCAAA
ATGAGAGAAATGTTCTTTGAAGATCATATTGATGATGCCAAATATTGTGGTCATTTGTATGGCCTTGGTTCTGGTTCATC
CTATGTACAGAATGGCACAGGGAATGCATATGAAGAGGAAGCCAACAAGCAGTCATGA

Library Parental gene expression (RPM)
SRP017611_brain 8 .89 RPM
SRP017611_kidney 7 .30 RPM
SRP017611_liver 4 .55 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000677 ortholog_one2many 4 retrogenes
retro_chof_1431, retro_chof_1581, retro_chof_822, retro_chof_963,
Callithrix jacchus ENSCJAG00000011795 possible_ortholog 1 retrogene
retro_cjac_720,
Felis catus ENSFCAG00000000591 ortholog_one2many 1 retrogene
retro_fcat_1889,
Homo sapiens ENSG00000198791 ortholog_one2many 2 retrogenes
retro_hsap_211, retro_hsap_4851,
Gorilla gorilla ENSGGOG00000015762 possible_ortholog 2 retrogenes
retro_ggor_282, retro_ggor_3027,
Macaca mulatta ENSMMUG00000001873 ortholog_one2many 1 retrogene
retro_mmul_2592,
Monodelphis domestica ENSMODG00000019055 possible_ortholog 2 retrogenes
retro_mdom_1898, retro_mdom_802,
Mustela putorius furo ENSMPUG00000017972 ortholog_one2many 1 retrogene
retro_mputfur_1596,
Nomascus leucogenys ENSNLEG00000002489 ortholog_one2many 2 retrogenes
retro_nleu_1860, retro_nleu_2373,
Otolemur garnettii ENSOGAG00000006324 ortholog_one2many 2 retrogenes
retro_ogar_1883, retro_ogar_505,
Pongo abelii ENSPPYG00000018385 ortholog_one2many 2 retrogenes
retro_pabe_3771, retro_pabe_428,
Sarcophilus harrisii ENSSHAG00000011828 possible_ortholog 2 retrogenes
retro_shar_103, retro_shar_631,
Ictidomys tridecemlineatus ENSSTOG00000009175 ortholog_one2many 2 retrogenes
retro_itri_1729, retro_itri_1730,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_118 100.00 100.00
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Download FASTA sequences of all ENSOCUG00000014589 retrocopies