Parental gene:

SSR1, ENSOCUG00000009083

Aliases:None
Description:signal sequence receptor, alpha (SSR1), mRNA [Source:RefSeq mRNA;Acc:NM_001082753]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:12:1039039..1078333(-)


>ENSOCUG00000009083
ATGAGACTCCTCCCCCGCTTGCTTCTGCTTCTGCTGCTCGTGTTCCCCGCCACCGTGCTGCTGCGAGGCGGCCCGGGAGG
CTCACTAGCAGAGGCTCAGGATCTTACGGAGGATGAAGAAACAGTGGAAGATTCGGTAATCGAAGATGAAGATGATGAAG
CTGAGGTAGAGGAAGATGAACCCACGGATTTGGCAGAAGATAAGGAAGAAGAAGATGTTTCTGGTGAACCAGAAGCTTCA
CCAAGTGCAGATACAACTATCTTGTTTGTAAAAGGAGAAGATTTTCCAGCAAATAACATTGTGAAGTTCCTGGTAGGCTT
TACAAACAAGGGTACAGAAGATTTTATCGTTGAATCCCTGGATGCCTCTTTTCGTTACCCTCAGGACTACCAGTTTTATA
TACAGAATTTCACAGCTCTTCCTCTGAACACTATAGTACCACCCCAGAGACAGGCAACTTTCGAGTACTCCTTCATTCCC
GCGGAGCCCATGGGTGGGCGACCCTTTGGTCTGGTCATCAATCTGAACTACAAAGATTTTAACGGTAATGTATTCCAAGA
TGCTGTCTTCAATCAAACAGTTACAGTTATTGAAAGAGAGGATGGGTTAGATGGAGAAACAATCTTCATGTATATGTTCC
TTGCTGGTCTTGGACTTCTGGTTGTTGTTGGACTTCATCAGCTCCTAGAATCTAGAAAGCGTAAGAGACCTATACAGAAA
GTAGAAATGGGTACGTCAAGTCAGAATGATGTTGACATGAGTTGGATTCCTCAGGAAACTTTGAATCAGATCAGTAAGTA
CTCCTTAAATAAAGCTTCTCCGAGACGGCTGCCCAGGAAGAGGGCGCAGAAGAGATCGGTGGGATCTGATGAACGCAGGC
GGAGAGAGACGCAC

Library Parental gene expression (RPM)
SRP017611_brain 60 .65 RPM
SRP017611_kidney 63 .55 RPM
SRP017611_liver 40 .39 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000022731 ortholog_one2one 1 retrogene
retro_btau_1285,
Dasypus novemcinctus ENSDNOG00000015772 ortholog_one2one 1 retrogene
retro_dnov_879,
Equus caballus ENSECAG00000019520 ortholog_one2one 1 retrogene
retro_ecab_399,
Echinops telfairi ENSETEG00000020111 ortholog_one2one 1 retrogene
retro_etel_1983,
Otolemur garnettii ENSOGAG00000014234 ortholog_one2one 1 retrogene
retro_ogar_1465,
Ictidomys tridecemlineatus ENSSTOG00000022608 ortholog_one2one 1 retrogene
retro_itri_1850,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1388 91.90 96.91
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Download FASTA sequences of all ENSOCUG00000009083 retrocopies