Parental gene:

SSBP3, ENSOCUG00000005903

Aliases:None
Description:single stranded DNA binding protein 3 [Source:HGNC Symbol;Acc:15674]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:13:112422985..112571787(+)


>ENSOCUG00000005903
ATGTTTGCCAAAGGCAAAGGCTCGGCGGTGCCCTCGGACGGACGCTCGGGAAAAAGGTTAGCTTTATACGTCTACGAGTA
TTTGCTGCACGTCGGAGCACAGAAGTCTGCACAGACCTTCTTATCGGAGATTCGATGGGAAAAAAACATCACTTTGGGAG
AACCGCCGGGGTTTTTGCACTCGTGGTGGTGTGTATTTTGGGACCTCTACTGTGCAGCCCCTGAAAGGAGAGACACTTGT
GAACATTCAAGTGAAGCAAAAGCCTTTCATGATTACAGCGCAGCAGCTGCCCCGAGCCCCGTGCTCGGCAACATTCCCCC
CAACGACGGGATGCCGGGGGGCCCCATCCCGCCCGGCTTCTTCCAGGGTCCTCCGGGGTCACAGCCCTCGCCGCACGCAC
AGCCTCCACCTCACAATGCTAGCAGCATGATGGGAGCCCACAGTCAGCCTTTTATGTCACCGCGATACGCAGGCGGCCCC
AGGCCCCCGATCAGAATGGGAAACCAGCCTCCAGGAGGAGTCCCTGGGACACAGCCGCTGCTGCCCAATTCCATGGATCC
CACGCGGCAACAAGGCCACCCCAACATGGGAGGATCGATGCAGAGAATGAACCCTCCCCGAGGCATGGGGCCCATGGGGC
CTGGCCCACAGAATTACGGCAGCGGCATGAGACCACCACCCAACTCCCTCGGCCCCGCCATGCCCGGGATTAACATGGGC
CCGGGAGCTGGCAGACCCTGGCCCAATCCCAACAGTGCTAACTCAATTCCATACTCCTCCTCGTCGCCCGGTACCTACGT
GGGACCCCCTGGTGGTGGTGGCCCCCCAGGAACGCCCATCATGCCTAGCCCTGCAGATTCCACGAATTCCAGTGACAACA
TCTACACAATGATTAATCCGGTGCCGCCTGGAGGCAGCCGCGCCAACTTCCCGATGGGTCCCGGCTCGGACGGCCCAATG
GGCGGCATGGGCGGCATGGAGCCCCACCACATGAACGGATCATTAGGGTCAGGCGACATAGATGGACTTCCAAAAAATTC
TCCTAACAACATAAGTGGCATTAGCAATCCTCCGGGCACCCCTCGGGACGACGGCGAGCTGGGCGGGAACTTTCTTCACT
CCTTCCAGAACGACAATTACTCTCCAAGCATGACGATGAGCGTG

Library Parental gene expression (RPM)
SRP017611_brain 116 .06 RPM
SRP017611_kidney 54 .53 RPM
SRP017611_liver 11 .56 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000005029 ortholog_one2one 1 retrogene
retro_cjac_3827,
Homo sapiens ENSG00000157216 ortholog_one2one 6 retrogenes
retro_hsap_1302, retro_hsap_1384, retro_hsap_2155, retro_hsap_2319, retro_hsap_2539, retro_hsap_3721,
Macropus eugenii ENSMEUG00000009291 ortholog_one2one 1 retrogene
retro_meug_1372,
Pan troglodytes ENSPTRG00000000770 ortholog_one2one 2 retrogenes
retro_ptro_2618, retro_ptro_2931,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_252 73.08 66.75
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Download FASTA sequences of all ENSOCUG00000005903 retrocopies