Parental gene:

GBAS, ENSOCUG00000001768

Aliases:None
Description:glioblastoma amplified sequence [Source:HGNC Symbol;Acc:4179]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:GL018788:890583..913769(-)


>ENSOCUG00000001768
ATGAAATGCACAAGCTGTGTGTGTATGAAAGGAAGTCTTTTACTGGCCATGAATCTGAACAGGAGGTTGACATCTTCCAA
TAACAGACCTCGAGAAGACAGCTGGTTAAAATCCTTGTTTGTCCGGAAAGTTGATCCAAGAAAAGATGCTCACTCTAATC
TCCTAGCCAAAAAGGAAACAAGCAGTCTATACAAGTTACAGTTTCACAACGTTAAACCAGAATGCCTAGATGCGTACAAC
AAAATTTGTCAAGAGGTATTGCCAAAGATTCATGAAGATAAACATTACCCTTGCACTTTGGTGGGGACTTGGAACACGTG
GTATGGCGAGCAGGATCAAGCTGTCCACCTCTGGAGGTATGAAGGAGGCTACCCAGCACTCACAGAGGTCATGAATAAGC
TCAGAGAAAATCAGGAATTTGTGAGCTTCCGCAAGGCAAGAAGTGACATGCTGCTGTCTAGGAAGAATCAGCTGCTGTTG
GAATTCAGTTTCTGGAATGAGCCTGTCCCACGGTCAGGACCCAATATATATGAACTCAGGTCTTACCAGCTCCGACCAGG
TACCATGATTGAATGGGGCAATTACTGGGCTCGTGCAATTCGCTTCAGACAGGATGGTAACGAAGCCGTCGGCGGCTTCT
TCTCTCAGATCGGGCAGCTATATATGGTGCATCACCTCTGGGCTTACAAGGACCTTCAGACCAGGGAAGACATACGGAAT
GCTGCCTGGCATAAACACGGCTGGGAGGAACTGGTGTACTACACAGTCCCACTCATTCAGGAAATGGAATCGAGAATCAT
GATCCCGCTGAAGACCTCGCCCCTGCAGTGA

Library Parental gene expression (RPM)
SRP017611_brain 51 .44 RPM
SRP017611_kidney 71 .76 RPM
SRP017611_liver 78 .62 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000031598 ortholog_one2one 1 retrogene
retro_btau_361,
Macropus eugenii ENSMEUG00000005152 ortholog_one2one 2 retrogenes
retro_meug_1273, retro_meug_469,
Myotis lucifugus ENSMLUG00000015038 ortholog_one2one 1 retrogene
retro_mluc_762,
Sarcophilus harrisii ENSSHAG00000009627 ortholog_one2one 1 retrogene
retro_shar_473,
Tursiops truncatus ENSTTRG00000015145 ortholog_one2one 1 retrogene
retro_ttru_1885,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1396 66.88 55.80
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Download FASTA sequences of all ENSOCUG00000001768 retrocopies