Parental gene:

Fgfr1op2, ENSMUSG00000040242

Aliases:Fgfr1op2, 1500031J01Rik
Description:FGFR1 oncogene partner 2 [Source:MGI Symbol;Acc:MGI:1914779]
Organism:Mouse (Mus musculus)
Coordinates:6:146577202..146599198(+)


>ENSMUSG00000040242
ATGAGCTGCACCATTGAGAAGGCACTTGCTGACGCTAAAGCCCTTGTTGAAAGGTTGAGAGATCATGATGATGCAGCAGA
GTCTCTCATCGAGCAGACCACTGCCCTCAGCAAGCGAGTGGAAGCGATGAAGCAGTATCAGGAGGAAATCCAAGAACTTA
ATGAAGTAGCAAGACATCGGCCACGATCCACACTAGTTATGGGAATCCAGCAAGAAAACAGACAAATCAGAGAATTACAA
CAAGAAAACAAAGAACTGCGGACATCCCTGGAAGAGCACCAGTCTGCCCTGGAACTGATAATGAGCAAGTACCGAGAGCA
GATGTTCAGACTGCTCATGGCCAGCAAGAAAGATGACCCAGGTATAATAATGAAGTTAAAAGAGCAACACTCAAAGATTG
ACATGGTACATCGTAACAGCTGCGAAGGATTCTTCCTGGATGCATCTCGGCACATCCTTGAAGCACCTCAGCACGGACTG
GAGAGGAGGCACTTGGAGGCAAATCAGAATGAGTTGCAAGCACATGTTGACCAAATCACCGAGATGGCAGCAGTAATGAG
AAAAGCTATTGAAATTGACGAGCAGCAGGGTTGCAAGGAACAGGAGCGGATATTTCAACTTGAACAAGAAAATAAAGGCT
TGAGAGAGATCCTTCAGATAACTCGAGAATCCTTTTTGAACCTTCGGAAGGATGATGCGTCAGAGAGTACGTCTCTATCT
GCCTTAGTGACTAACAGTGACCTGAGTCTGAGGAAGAGCTGA

Library Parental gene expression (RPM)
SRP007412_brain 77 .24 RPM
SRP007412_cerebellum 41 .34 RPM
SRP007412_heart 55 .88 RPM
SRP007412_kidney 49 .72 RPM
SRP007412_liver 40 .83 RPM
SRP007412_testis 130 .90 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000006966 ortholog_one2one 2 retrogenes
retro_dnov_2342, retro_dnov_2594,
Equus caballus ENSECAG00000016890 ortholog_one2one 1 retrogene
retro_ecab_988,
Homo sapiens ENSG00000111790 ortholog_one2one 1 retrogene
retro_hsap_994,
Loxodonta africana ENSLAFG00000012476 ortholog_one2one 1 retrogene
retro_lafr_486,
Monodelphis domestica ENSMODG00000016618 ortholog_one2many 2 retrogenes
retro_mdom_1788, retro_mdom_244,
Pongo abelii ENSPPYG00000004375 ortholog_one2one 1 retrogene
retro_pabe_839,
Pan troglodytes ENSPTRG00000004783 ortholog_one2one 1 retrogene
retro_ptro_756,
Tupaia belangeri ENSTBEG00000011581 ortholog_one2one 2 retrogenes
retro_tbel_3732, retro_tbel_4608,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_720 95.39 100.00
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2. retro_mmus_3669 89.67 98.60
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Download FASTA sequences of all ENSMUSG00000040242 retrocopies