Parental gene: | Lsm1, ENSMUSG00000037296 |
| Aliases: | Lsm1, 2810025O06Rik, CASM |
| Description: | LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1914457] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 8:25785590..25803975(+) |
>ENSMUSG00000037296
ATGAACTATATGCCCGGCACCGCCAGCCTCATCGAGGACATCGACAAAAAGCACTTGGTCCTACTTCGAGATGGAAGAAC
ACTTATAGGTTTTTTAAGAAGCATTGATCAATTTGCTAACTTAGTGCTCCATCAGACTGTGGAGCGAATTCATGTGGGCA
AAAAGTACGGTGATATTCCTCGAGGGATTTTCGTGGTCAGAGGAGAGAATGTGGTCCTACTAGGAGAAATAGACCTGGAG
AAGGAGAGTGACACGCCCCTTCAGCAAGTGTCTATTGAAGAGATCCTAGAGGAACAGAGGGTGCAACAGCAGACCAGACT
GGAGGCAGAGAAGCTGAAGGTCCAGACCCTTAAAGATCGGGGCCTTTCCATTCCTCGCGCAGACACTCTGGACGAGTACT
GA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 11 .61 RPM |
| SRP007412_cerebellum | 8 .55 RPM |
| SRP007412_heart | 4 .30 RPM |
| SRP007412_kidney | 7 .06 RPM |
| SRP007412_liver | 7 .59 RPM |
| SRP007412_testis | 7 .82 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000011141 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000003734 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000009883 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000015399 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000017260 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_3725 | 88.06 | 100.00 | Please wait, loading  |
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Download FASTA sequences of all ENSMUSG00000037296 retrocopies