Parental gene:

Aimp1, ENSMUSG00000028029

Aliases:Aimp1, 9830137A06Rik, AIMP1/p43, EMAPII, Emap2, Scye1, p43
Description:aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:MGI Symbol;Acc:MGI:102774]
Organism:Mouse (Mus musculus)
Coordinates:3:132660497..132683879(-)


>ENSMUSG00000028029
ATGTTTCTCTGCCGATTCTGGGGAAAGATGGCAACGAATGATGCTGTTCTGAAGAGGCTGGAGCAGAAGGGTGCAGAGGC
GGATCAGATCATCGAATATCTCAAGCAGCAGGTTGCTCTTCTTAAGGAGAAAGCAATTTTGCAGGCAACAATGAGAGAAG
AAAAGAAACTTCGAGTTGAAAATGCTAAACTGAAAAAAGAAATAGAAGAGCTAAAGCAAGAGCTGATTCTGGCAGAAATT
CATAACGGAGTGGAGCAAGTGCGTGTTCGATTGAGTACTCCACTGCAGACGAACTGTACTGCTTCTGAAAGTGTGGTGCA
GTCTCCATCAGTAGCAACCACCGCCTCTCCTGCTACAAAAGAGCAGATCAAAGCGGGAGAAGAAAAGAAGGTGAAAGAGA
AGACTGAAAAGAAAGGAGAGAAAAAGGAGAAGCAGCAGTCGGCAGCAGCAAGTACTGACTCCAAGCCTATCGACGCATCG
CGTCTGGATCTTCGAATTGGTTGTATTGTTACTGCCAAGAAGCACCCTGATGCAGATTCACTGTATGTGGAGGAAGTAGA
TGTGGGAGAAGCAGCCCCGCGCACGGTCGTCAGCGGGCTGGTGAATCATGTTCCTCTAGAACAGATGCAAAATCGTATGG
TGGTTTTACTCTGTAATCTGAAGCCTGCAAAGATGCGGGGAGTTCTGTCTCAAGCCATGGTGATGTGTGCCAGTTCACCA
GAGAAAGTGGAGATTCTGGCCCCTCCCAACGGGTCCGTTCCTGGGGACAGAATTACTTTTGATGCTTTTCCTGGAGAGCC
TGACAAGGAGCTAAACCCTAAGAAGAAGATCTGGGAGCAGATCCAGCCTGACCTGCACACCAATGCTGAGTGTGTGGCCA
CATACAAAGGAGCTCCCTTTGAGGTGAAGGGGAAGGGAGTTTGCAGAGCCCAAACCATGGCCAATAGTGGAATTAAATAA

Library Parental gene expression (RPM)
SRP007412_brain 28 .36 RPM
SRP007412_cerebellum 32 .70 RPM
SRP007412_heart 33 .84 RPM
SRP007412_kidney 31 .51 RPM
SRP007412_liver 21 .44 RPM
SRP007412_testis 51 .50 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000619 ortholog_one2one 2 retrogenes
retro_chof_1176, retro_chof_2050,
Callithrix jacchus ENSCJAG00000015885 ortholog_one2one 1 retrogene
retro_cjac_2504,
Dipodomys ordii ENSDORG00000005018 ortholog_one2one 1 retrogene
retro_dord_540,
Mustela putorius furo ENSMPUG00000008952 ortholog_one2one 1 retrogene
retro_mputfur_1606,
Pongo abelii ENSPPYG00000014981 ortholog_one2one 1 retrogene
retro_pabe_1780,
Rattus norvegicus ENSRNOG00000011384 ortholog_one2many 1 retrogene
retro_rnor_1704,
Ictidomys tridecemlineatus ENSSTOG00000008178 ortholog_one2one 1 retrogene
retro_itri_1173,
Tupaia belangeri ENSTBEG00000004412 ortholog_one2one 1 retrogene
retro_tbel_4008,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_2271 77.22 54.86
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2. retro_mmus_3334 77.84 54.55
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Download FASTA sequences of all ENSMUSG00000028029 retrocopies