Parental gene:

Eif4a3, ENSMUSG00000025580

Aliases:Eif4a3, 2400003O03Rik, Ddx48, eIF4A-III, mKIAA0111
Description:eukaryotic translation initiation factor 4A3 [Source:MGI Symbol;Acc:MGI:1923731]
Organism:Mouse (Mus musculus)
Coordinates:11:119288362..119300089(-)


>ENSMUSG00000025580
ATGGCGGCTAACGCCACGATGGCGACGTCTGGCTCGGCGCGGAAGCGGCTGCTCAAAGAGGAGGACATGACCAAAGTGGA
GTTCGAGACGAGCGAGGAGGTGGACGTGACCCCCACGTTCGACACCATGGGCCTGCGAGAGGACCTGCTGCGCGGCATCT
ACGCCTACGGTTTTGAAAAACCTTCAGCGATTCAGCAGCGTGCTATCAAGCAGATAATTAAAGGGAGAGATGTCATTGCA
CAGTCTCAGTCTGGCACAGGCAAGACGGCCACCTTCAGTGTCTCAGTGCTGCAGTGCTTGGATATCCAGGTTCGAGAAAC
CCAAGCTTTGATCCTGGCTCCAACCAGGGAGTTAGCGGTGCAGATTCAGAAGGGTCTGCTCGCGCTGGGGGATTACATGA
ACGTGCAGTGCCATGCCTGCATTGGGGGCACCAACGTCGGCGAGGACATCCGGAAGCTGGACTACGGACAGCACGTGGTG
GCAGGCACGCCGGGACGCGTCTTTGATATGATCCGCCGGAGAAGTTTACGGACACGGGCTATCAAGATGCTGGTTTTGGA
TGAGGCTGATGAAATGTTGAACAAAGGTTTCAAGGAGCAGATCTATGATGTGTACAGGTACTTGCCACCAGCCACACAGG
TCGTCCTCATCAGCGCCACACTGCCTCATGAGATCCTGGAGATGACCAACAAGTTCATGACCGACCCCATCCGCATCTTG
GTGAAGCGTGATGAGTTGACTCTGGAAGGCATCAAACAGTTCTTTGTGGCTGTGGAAAGAGAGGAATGGAAATTTGATAC
TCTATGTGATCTCTATGACACGCTGACCATCACCCAGGCCGTCATCTTCTGCAACACCAAGCGGAAGGTTGACTGGCTGA
CAGAGAAAATGAGAGAAGCCAATTTCACTGTGTCGTCCATGCATGGAGACATGCCCCAGAAAGAACGAGAGTCTATCATG
AAGGAGTTCCGGTCAGGTGCCAGCCGGGTGCTCATCTCCACAGACGTCTGGGCCCGGGGCCTGGATGTCCCTCAGGTGTC
CCTCATCATTAACTACGACCTGCCCAACAACAGAGAACTGTACATTCACAGAATTGGGAGATCGGGTCGGTATGGACGAA
AAGGTGTGGCCATCAATTTTGTGAAGAATGATGACATCCGGATTCTCAGGGACATTGAGCAGTACTACTCCACCCAGATA
GACGAGATGCCCATGAATGTGGCTGACCTCATCTGA

Library Parental gene expression (RPM)
SRP007412_brain 33 .13 RPM
SRP007412_cerebellum 42 .16 RPM
SRP007412_heart 41 .78 RPM
SRP007412_kidney 46 .58 RPM
SRP007412_liver 31 .71 RPM
SRP007412_testis 59 .92 RPM



Species Parental gene accession Homology type Retrogenes number
Microcebus murinus ENSMICG00000009136 possible_ortholog 2 retrogenes
retro_mmur_444, retro_mmur_50,
Myotis lucifugus ENSMLUG00000009585 ortholog_many2many 1 retrogene
retro_mluc_65,
Mus musculus ENSMUSG00000059796 within_species_paralog 7 retrogenes
retro_mmus_1810, retro_mmus_1853, retro_mmus_2320, retro_mmus_2473, retro_mmus_3122, retro_mmus_325, retro_mmus_527,
Ornithorhynchus anatinus ENSOANG00000000334 ortholog_one2many 1 retrogene
retro_oana_47,
Otolemur garnettii ENSOGAG00000007495 possible_ortholog 1 retrogene
retro_ogar_212,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_70 96.11 100.00
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2. retro_mmus_2752 97.32 100.00
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Download FASTA sequences of all ENSMUSG00000025580 retrocopies