Parental gene:

Sbds, ENSMUSG00000025337

Aliases:Sbds, 4733401P19Rik, AI836084, CGI-97, SDS
Description:Shwachman-Bodian-Diamond syndrome homolog (human) [Source:MGI Symbol;Acc:MGI:1913961]
Organism:Mouse (Mus musculus)
Coordinates:5:130245730..130255530(-)


>ENSMUSG00000025337
ATGTCGATCTTCACCCCCACCAACCAGATCCGACTGACCAATGTGGCCGTGGTGCGGATGAAGCGGGGAGGGAAGCGCTT
CGAAATCGCCTGCTATAAAAACAAGGTCGTCGGCTGGCGGAGTGGCGTGGAAAAAGACCTTGATGAAGTTCTGCAGACCC
ATTCAGTGTTTGTAAATGTTTCCAAAGGTCAGGTTGCCAAGAAGGAAGACCTCATCAGTGCATTTGGGACAGACGACCAG
ACTGAAATCTGCAAGCAGATTTTGACTAAAGGAGAAGTTCAAGTGTCAGATAAAGAACGGCACACACAGCTGGAGCAGAT
GTTTAGGGATATCGCCACCATTGTGGCAGACAAGTGTGTGAACCCAGAAACAAAGAGACCTTACACCGTTATCCTCATCG
AGAGAGCCATGAAGGACATCCACTACTCCGTGAAACCCAACAAGAGCACAAAGCAACAGGCTTTGGAAGTGATAAAGCAG
CTGAAAGAGAAGATGAAGATAGAGCGGGCCCACATGCGATTGCGCTTCATCCTGCCAGTGAACGAAGGGAAGAAGCTGAA
GGAGAAGCTGAAGCCACTGATGAAGGTGGTGGAGAGTGAGGACTACAGCCAGCAGCTGGAGATCGTGTGCCTCATCGACC
CAGGCTGCTTCAGAGAAATTGATGAGCTAATAAAAAAGGAAACGAAAGGCAGGGGTTCTCTGGAAGTGCTCAGTCTGAAG
GACGTGGAGGAAGGCGATGAGAAGTTTGAATGA

Library Parental gene expression (RPM)
SRP007412_brain 48 .06 RPM
SRP007412_cerebellum 63 .87 RPM
SRP007412_heart 40 .56 RPM
SRP007412_kidney 79 .21 RPM
SRP007412_liver 54 .51 RPM
SRP007412_testis 123 .50 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000003795 ortholog_one2one 2 retrogenes
retro_chof_1999, retro_chof_623,
Callithrix jacchus ENSCJAG00000004283 ortholog_one2one 1 retrogene
retro_cjac_3984,
Dasypus novemcinctus ENSDNOG00000016904 ortholog_one2one 1 retrogene
retro_dnov_748,
Loxodonta africana ENSLAFG00000008763 ortholog_one2one 1 retrogene
retro_lafr_920,
Monodelphis domestica ENSMODG00000006644 ortholog_one2one 1 retrogene
retro_mdom_2004,
Otolemur garnettii ENSOGAG00000009011 ortholog_one2many 1 retrogene
retro_ogar_3368,
Ochotona princeps ENSOPRG00000008721 ortholog_one2one 6 retrogenes
retro_opri_1179, retro_opri_154, retro_opri_363, retro_opri_484, retro_opri_698, retro_opri_957,
Rattus norvegicus ENSRNOG00000000888 ortholog_one2many 1 retrogene
retro_rnor_686,
Ictidomys tridecemlineatus ENSSTOG00000022203 ortholog_one2one 1 retrogene
retro_itri_1763,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_950 88.68 84.80
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Download FASTA sequences of all ENSMUSG00000025337 retrocopies