Parental gene:

Trappc6b, ENSMUSG00000020993

Aliases:Trappc6b, 5830498C14Rik, C79212
Description:trafficking protein particle complex 6B [Source:MGI Symbol;Acc:MGI:1925482]
Organism:Mouse (Mus musculus)
Coordinates:12:59043092..59061461(-)


>ENSMUSG00000020993
ATGGCGGACGAGGCGTTGTTTTTGCTTCTCCATAACGAGATGGTGTCCGGAGTGTACAAGTCCGCCGAGCAGGGGGAAGT
GGAAAATGGAAGGTGTGTTACTAAGCTGGAGAGCATGGGGTTCCGAGTGGGGCAAGGACTGATAGAAAGGTTTACGAAAG
ATACTGCAAGGTTCAAGGATGAATTAGACATCATGAAGTTCATCTGTAAAGATTTTTGGACTACAGTATTCAAGAAACAG
ATTGACAATCTGAGGACAAATCATCAGGGCATATATGTACTTCAGGACAACAAATTTCGACTACTCATTCAGCTGTCTGC
AGGAAAACAGTATTTAGAACATGCGTCCAAGTATCTAGCATTCACATGTGGCTTAATCAGAGGTGGTTTGTCGAACTTGG
GAATAAAAAGTATTGTAACAGCTGAAGTCTCTTCAATGCCTGCCTGCAAATTTCAGGTGATGATACAGAAGCTGTAG

Library Parental gene expression (RPM)
SRP007412_brain 46 .28 RPM
SRP007412_cerebellum 38 .91 RPM
SRP007412_heart 29 .64 RPM
SRP007412_kidney 47 .14 RPM
SRP007412_liver 22 .72 RPM
SRP007412_testis 28 .04 RPM



Species Parental gene accession Homology type Retrogenes number
Echinops telfairi ENSETEG00000013828 ortholog_one2one 1 retrogene
retro_etel_1104,
Myotis lucifugus ENSMLUG00000002627 ortholog_one2one 2 retrogenes
retro_mluc_1179, retro_mluc_663,
Oryctolagus cuniculus ENSOCUG00000002171 ortholog_one2one 1 retrogene
retro_ocun_813,
Sarcophilus harrisii ENSSHAG00000001400 ortholog_one2one 1 retrogene
retro_shar_235,
Ictidomys tridecemlineatus ENSSTOG00000002897 ortholog_one2one 2 retrogenes
retro_itri_476, retro_itri_795,
Tupaia belangeri ENSTBEG00000003331 ortholog_one2one 1 retrogene
retro_tbel_4529,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_1734 73.11 74.68
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2. retro_mmus_2069 95.57 100.00
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Download FASTA sequences of all ENSMUSG00000020993 retrocopies