Parental gene:

RPS24, ENSMODG00000025091

Aliases:None
Description:ribosomal protein S24 [Source:HGNC Symbol;Acc:10411]
Organism:Opossum (Monodelphis domestica)
Coordinates:1:55421398..55427975(+)


>ENSMODG00000025091
ATGATTGGTTCTTCCTTCTCGCGGCCCTTTCTCTCTCCTGCTGCTCGAGGAGCCGGCCGCCACCATGGTGAGTCTTCCTG
GGTTCTAGACGCCATCCGTCTCGCATCCGCGCCATCCCTCGGCTCGGCTCTCGACTCTCTTCTCAGCCCGTCTTCTGGAA
GCCTCTTGTCCGCTCCGATGTTGAAACTAGCCGGGAACCGCGCTCCAAGAGCGAATGACACTGTAACCATCAGAACCAGG
AAGTTTATGACAAACAGACTTCTGCAACGTAAACAGATGGTCATAGATGTTCTTCATCCTGGAAAGGCCACAGTACCCAA
GACTGAAATTAGAGAAAAATTGGCCAAGATGTACAAAACAACTCCAGATGTCATTTTTGTCTTTGGATTCAGAACCCATT
TTGGTGGTGGCAAAACAACAGGCTTTGGCATGATTTATGATTCCCTTGACTATGCAAAGAAAAATGAACCAAAGCACAGA
CTTGCAAGGCATGGTCTGTATGAGAAGAAAAAGACATCAAGAAAGCAGCGAAAGGAACGAAAAAACAGAATGAAGAAAGT
CAGGGGTACTGCAAAGGCAAACGTCGGTGCTGGCAAAAAGCAGAAATGA

Library Parental gene expression (RPM)
SRP007412_brain 641 .99 RPM
SRP007412_cerebellum 538 .32 RPM
SRP007412_heart 899 .08 RPM
SRP007412_kidney 1983 .15 RPM
SRP007412_liver 1921 .31 RPM
SRP007412_testis 594 .02 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000010243 ortholog_one2one 18 retrogenes
retro_dnov_1299, retro_dnov_1305, retro_dnov_1394, retro_dnov_1444, retro_dnov_1470, retro_dnov_1471, retro_dnov_168, retro_dnov_1889, retro_dnov_1920, retro_dnov_1985, retro_dnov_2074, retro_dnov_2357, retro_dnov_288, retro_dnov_309, retro_dnov_551, retro_dnov_73, retro_dnov_782, retro_dnov_92,
Equus caballus ENSECAG00000016939 ortholog_one2one 5 retrogenes
retro_ecab_239, retro_ecab_398, retro_ecab_422, retro_ecab_514, retro_ecab_746,
Echinops telfairi ENSETEG00000007481 ortholog_one2one 32 retrogenes
retro_etel_1119, retro_etel_1242, retro_etel_1274, retro_etel_1339, retro_etel_1395, retro_etel_1663, retro_etel_1688, retro_etel_1783, retro_etel_1800, retro_etel_1806, retro_etel_183, retro_etel_1901, retro_etel_1934, retro_etel_1978, retro_etel_1991, retro_etel_2040, retro_etel_2104, retro_etel_223, retro_etel_287, retro_etel_289, retro_etel_369, retro_etel_422, retro_etel_476, retro_etel_503, retro_etel_523, retro_etel_67, retro_etel_744, retro_etel_752, retro_etel_815, retro_etel_904, retro_etel_91, retro_etel_94,
Gadus morhua ENSGMOG00000012595 ortholog_one2many 1 retrogene
retro_gmor_15,
Microcebus murinus ENSMICG00000005951 ortholog_one2one 7 retrogenes
retro_mmur_1308, retro_mmur_132, retro_mmur_1338, retro_mmur_1636, retro_mmur_217, retro_mmur_583, retro_mmur_902,
Ornithorhynchus anatinus ENSOANG00000006329 ortholog_one2one 1 retrogene
retro_oana_54,
Pongo abelii ENSPPYG00000002304 ortholog_one2one 1 retrogene
retro_pabe_184,
Sarcophilus harrisii ENSSHAG00000008090 ortholog_one2one 3 retrogenes
retro_shar_276, retro_shar_303, retro_shar_697,
Sus scrofa ENSSSCG00000010328 ortholog_one2many 8 retrogenes
retro_sscr_1212, retro_sscr_14, retro_sscr_242, retro_sscr_289, retro_sscr_491, retro_sscr_564, retro_sscr_718, retro_sscr_902,
Tursiops truncatus ENSTTRG00000007845 ortholog_one2one 3 retrogenes
retro_ttru_1462, retro_ttru_740, retro_ttru_86,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_1303 54.63 52.97
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2. retro_mdom_1706 64.55 53.47
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3. retro_mdom_1914 61.29 60.40
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Download FASTA sequences of all ENSMODG00000025091 retrocopies