Parental gene:

ENSMODG00000007541

Aliases:None
Description:None
Organism:Opossum (Monodelphis domestica)
Coordinates:4:42648218..42663517(-)


>ENSMODG00000007541
ATGGCGGGCGACGAGCCGGGAGTGACTCTGGGGCAGCCGCATCTGTCTCGCCAGGATTTGACCACTTTGGATGTTACCAA
GTTGACTCCGCTTTCACATGAAGTTATCAGCAGACAAGCCACGATCAATATAGGTACAATTGGTCATGTAGCACATGGAA
AGTCAACAGTAGTAAAAGCTATTTCTGGAGTTCACACTGTTCGATTCAAAAATGAGCTGGAAAGAAATATTACCATTAAA
TTGGGATATGCTAATGCTAAGATTTACCAACTTGATGACCCAAGTTGTTCTCGGCCAGAATGTTACAGATCTTGTGGAAG
TAGCACACCTGATGAATTTCCTACAGACATTCCAGGAACTAAAGGAAACTTTAAATTAGTCAGACATGTCTCCTTTGTGG
ATTGTCCTGGTCACGATATTTTGATGGCTACTATGCTGAACGGTGCAGCAGTCATGGATGCAGCTCTGTTATTAATAGCT
GGCAATGAGTCTTGTCCTCAGCCTCAGACTTCTGAGCACCTAGCTGCCATTGAAATCATGAAATTGAAACACATTCTGAT
TCTACAGAATAAGATTGATTTGGTGAAAGAAAGTCAGGCTAAGGAACAATATGAACAAATCCTTGCATTTGTACAAGGTA
CAGTTGCAGAGGGAGCTCCTATTATTCCAATTTCTGCTCAACTGAAGTATAATATTGAAGTTGTTTGTGAATATATAGTA
AAGAAAATTCCAGTACCTCCAAGAGACTTTACTTCAGAACCCAGACTTATTGTTATTCGGTCTTTTGACGTCAACAAGCC
TGGTTGTGAAGTTGATGACCTTAAGGGTGGTGTGGCTGGTGGTAGTATTCTCAAAGGAGTATTAAAGGTGGGACAGGAGT
TGGAGGTCAGGCCTGGCATTGTCTCTAAAGATAGTGAAGGGAAACTCATGTGTAAGCCAATCTTTTCCAAAATTGTATCA
CTTTTTGCAGAGCATAATGACCTGCAGTATGCTGCTCCTGGAGGCCTTATTGGGGTTGGAACAAAAATTGATCCAACTTT
GTGCCGAGCTGACAGAATGGTGGGACAGGTTCTTGGTGCAGTTGGAGCATTGCCTGAAATCTTTACAGAATTGGAAATTT
CCTATTTCCTGCTTAGAAGACTTTTAGGAGTGCGCACTGAAGGAGACAAAAAAGCAGCGAAAGTACAAAAATTGTCCAAG
AATGAAGTGCTCATGGTGAACATAGGCTCCTTGTCTACTGGAGGAAGAGTCAGTGCAGTAAAGGCTGATTTAGGCAAAAT
TGTTCTTACTAATCCTGTCTGCACAGAAATTGGAGAAAAAATTGCCCTTAGTCGAAGAGTTGAGAAACATTGGCGTTTGA
TTGGCTGGGGTCAGATAAGAAGAGGAGTTACAATCAAGCCAACGGTAGATGATGATTAA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000014337 ortholog_one2many 1 retrogene
retro_btau_1497,
Dasypus novemcinctus ENSDNOG00000018584 ortholog_one2one 1 retrogene
retro_dnov_1454,
Equus caballus ENSECAG00000017343 ortholog_one2many 1 retrogene
retro_ecab_810,
Echinops telfairi ENSETEG00000000341 ortholog_one2one 4 retrogenes
retro_etel_1061, retro_etel_126, retro_etel_1590, retro_etel_2017,
Loxodonta africana ENSLAFG00000011052 ortholog_one2one 1 retrogene
retro_lafr_971,
Macaca mulatta ENSMMUG00000006979 ortholog_one2many 4 retrogenes
retro_mmul_1965, retro_mmul_2258, retro_mmul_473, retro_mmul_713,
Mus musculus ENSMUSG00000035150 ortholog_one2many 2 retrogenes
retro_mmus_1408, retro_mmus_3433,
Pongo abelii ENSPPYG00000020194 ortholog_one2many 1 retrogene
retro_pabe_10,
Pteropus vampyrus ENSPVAG00000002533 ortholog_one2one 1 retrogene
retro_pvam_936,
Sus scrofa ENSSSCG00000012178 ortholog_one2many 1 retrogene
retro_sscr_805,
Ictidomys tridecemlineatus ENSSTOG00000007144 ortholog_one2one 1 retrogene
retro_itri_582,
Tursiops truncatus ENSTTRG00000012474 ortholog_one2one 4 retrogenes
retro_ttru_1080, retro_ttru_1638, retro_ttru_617, retro_ttru_686,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_732 94.91 95.13
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2. retro_mdom_1650 83.33 56.57
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Download FASTA sequences of all ENSMODG00000007541 retrocopies