Parental gene:

NIT2, ENSMMUG00000020024

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:2:20543179..20562532(+)


>ENSMMUG00000020024
ATGGCCACTTTCCGCCTGGCCCTCATCCAGCTTCAAATTTCTTCCATCAAATCAGATAACGTCACTCGAGCTTGTAGCTT
TATCCGGGAGGCAGCAACGCAAGGAGCCAAAATAGTTTCTTTGCCGGAATGCTTTAATTCTCCGTATGGAACGAAATATT
TTCCTGAATATGCAGAGAAAATTCCTGGTGAATCCACACAGAAGCTTTCTGAAGTAGCAAAGGAATGCAGCATATATCTT
ATTGGAGGCTCTATCCCTGAAGAGGATGCTGGGAAATTATATAACACCTGTGCTGTGTTTGGGCCTGATGGAACTTTACT
AGCAAAGTACAGAAAGATCCATCTGTTTGACATTGATGTTCCTGGAAAAATTACATTTCAAGAATCTGAAACGTTGAGTC
CGGGTGATAGTTTCTCCACATTTGATACTCCTTACTGCAGAGTGGGTCTGGGCATCTGCTACGACATGCGGTTTGCAGAG
CTCGCACAAATCTACGCACAGAGAGGCTGCCAGCTGTTGGTATATCCAGGAGCTTTTAATCTGACCACTGGACCAGCCCA
CTGGGAGTTGCTTCAGCGAAGCCGGGCTGTTGATAATCAGGTGTATGTGGCCACAGCCTCTCCTGCCCGGGATGACAAAG
CCTCCTATGTTGCCTGGGGACACAGCACCGTGGTGAACCCTTGGGGGGAGGTCCTAGCCAAAGCTGGCACAGAAGAAGCC
ATCGTGTATTCAGACATAGACCTGAAGAAGCTGGCTGAAATACGCCAGCAAATGCCCGTTTTTAGACAGAAGCGATCAGA
CCTCTATGCTGTGGAGATGAAAAAGCCCTAA

Library Parental gene expression (RPM)
SRP007412_brain 12 .89 RPM
SRP007412_brain_prefrontal_cortex 14 .20 RPM
SRP007412_cerebellum 5 .62 RPM
SRP007412_heart 17 .55 RPM
SRP007412_kidney 83 .92 RPM
SRP007412_liver 46 .27 RPM
SRP007412_testis 4 .26 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003980 ortholog_one2one 1 retrogene
retro_amel_1002,
Callithrix jacchus ENSCJAG00000000590 ortholog_one2one 1 retrogene
retro_cjac_3014,
Homo sapiens ENSG00000114021 ortholog_one2one 1 retrogene
retro_hsap_411,
Gorilla gorilla ENSGGOG00000003724 ortholog_one2one 1 retrogene
retro_ggor_406,
Mustela putorius furo ENSMPUG00000011450 ortholog_one2one 1 retrogene
retro_mputfur_805,
Nomascus leucogenys ENSNLEG00000002631 ortholog_one2one 1 retrogene
retro_nleu_1009,
Pan troglodytes ENSPTRG00000015161 ortholog_one2one 1 retrogene
retro_ptro_315,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_505 74.85 59.78
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2. retro_mmul_1758 94.56 85.87
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Download FASTA sequences of all ENSMMUG00000020024 retrocopies