Parental gene:

KHDC1, ENSMMUG00000018573

Aliases:None
Description:KH homology domain-containing protein 1 [Source:RefSeq peptide;Acc:NP_001244837]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:4:69467434..69553496(-)


>ENSMMUG00000018573
ATGGACATGGGAACTAGTGCTCTCAGCAAGAAGCCGTGGTGGACCCTGCCTGAAAACTTTCATGCTCCAATGGTGTTCCA
CATGGAAGAGGACCAGGAGGAGCTCATCTTTGGGCACGGTGACACATACCTTCGCTGCATTGAGGTGCACAGCCACACCC
TTATTCAGCTGGAGAGTTGGTTCACAGCTACAGGCCAGACTCGTGTGACTGTAGTCGGACCACATAGGGCAAGGCAGTGG
CTGCTGCACATGTTCTGTTGCGTGGGGAGCCAGGACTCCTATCATCATGCTCGAGGTGGGAGCAGAGCATGGACATGGGA
ACAGGTGCTCTCAGCAAGGAGCCGTGGTGGACCCTACCCGAAAACTTTCATGCTCCAATTGTGTTCCACATGGAAGAGGA
CCAGGAGGAGCTCATCTTCGGACTTGATGACACATACCTTCGCTGCATTGAGCTGCACAGCCACACCCTTATTCAGCTGG
TGTTTTACAGCTACAGGCCAGACTCGTGTGACCGTAGTCGGACCACCAATGGCAAAGCAGTGGCTGCTGCTCATGTTCCG
TTCCGTGGGGAGCCACTACTCCAAGTGTCACGCTCAAGGTCTGAAGATGCTCGAGCGTGTCCGAAGCCAGCCCCTGACCA
ACGACGACCTGGTCGCCTCCATTAGCCTGCCACCCTACACCGGAGACTGA

Library Parental gene expression (RPM)
SRP007412_brain 4 .59 RPM
SRP007412_brain_prefrontal_cortex 11 .11 RPM
SRP007412_cerebellum 4 .58 RPM
SRP007412_heart 2 .18 RPM
SRP007412_kidney 1 .76 RPM
SRP007412_liver 0 .24 RPM
SRP007412_testis 3 .77 RPM



Species Parental gene accession Homology type Retrogenes number
Dipodomys ordii ENSDORG00000009236 ortholog_one2many 4 retrogenes
retro_dord_249, retro_dord_47, retro_dord_607, retro_dord_82,
Microcebus murinus ENSMICG00000006451 ortholog_one2many 1 retrogene
retro_mmur_647,
Mus musculus ENSMUSG00000067750 ortholog_many2many 1 retrogene
retro_mmus_464,
Oryctolagus cuniculus ENSOCUG00000028154 ortholog_many2many 1 retrogene
retro_ocun_735,
Otolemur garnettii ENSOGAG00000006102 ortholog_one2many 1 retrogene
retro_ogar_2275,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_84 82.03 78.05
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Download FASTA sequences of all ENSMMUG00000018573 retrocopies