Parental gene:

MMU.2909, ENSMMUG00000017696

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:2:137188021..137222764(-)


>ENSMMUG00000017696
GAGGAGACGTGTAGGGGCCGGGTTCGGGTGAACTCTCACCCGAGCGGTTTCTTTTTCCGGGACAACATGGCGCCGTCCAC
GCCGCTCTTGACAGTCCGAGGATCAGAAGGACTGTACATGGTGAATGGACCACCACATTTTACAGAAAGCACAGTGTTTC
CAAGGGAATCTGGGAAGAATTGCAAAGTCTATACCTTTAGTAAGGATGGGACCTTGTTTGCCTGGGGCAATGGAGAAAAA
GTAAATATTATCAGTGTCATTAACAAGGGGCTACTGCACTCCTTCGACCTCCCAAAGGCAGTTTGCCTTGAATTCTCGCC
CAAAAATACTGTCCTGGCAACGTGGCAGCCTTATACTACTTCTAAAGATGGCACAGCTGGGATACCCAACCTACAACTTT
ATGATGTGAAAACTGGGACATGTTTGAAATCTTTCATCCAGAAAAAAACGCAAAATTGGTGTCCATCCTGGTCAGAAGAT
GAAACTCTTTGTGCCCGCAATGTTAACAATGAAGTTCACTTCTTTGAAAACAACAATTTTAACACAATTGCAAATAAATT
GCATTTGCAAAAAATTAATGATTTTGTATTATCACCTGGACCCCAACCATACAAGGTGGCTGTCTATGTTCCAGGAAGTA
AAGGTGCACCTTCATTTGTTAGATTATATCAGTACCCCAACTTTGCTGGACCTCATGCAGCTTTAGCTAATAAAAGTTTC
TTTAAGGCAGATAAAGTTACAATGCTGTGGAATAAAAAAGCTACTGCTGTGTTGGTAATAGCTAGCACAGATGTTGACAA
GACAGGAGCTTCCTACTATGGAGAGCAAACTCTGCACTATATTGCAACAAATGGCGAAAGTGCTGTAGTGCAATTACCAA
AAAATGGCCCCATTTATGATGTAGTTTGGAATTCTAGTTCTACTGAGTTTTGTGCTGTATATGGTTTTATGCCTGCCAAA
GCGACAATTTTCAACTTGAGATGTGATCCTGTATTTGACTTTGGAACTGGTCCTCGTAATGCAGCCTACTATAGCCCTCA
TGGACATATATTAGTATTAGCTGGATTTGGAAATCTGAGAGGACAAATGGAAGTGTGGGATGTGAAAAACTACAAACTTA
TTTCTAAACCAGTGGCTTCTGATTCTACATATTTTGCTTGGTGCCCAGATGGTGAGCATATTTTAACAGCTACATGTGCT
CCCAGGTTACGGGTTAATAATGGATACAAAATTTGGCATTATACTGGCTCTATCTTGCACAAGTATGATGTGCCATCAAA
TGCAGAATTATGGCAGGTTTCTTGGCAGCCATTTTTGGATGGAGTATTTCCAGCAAAAACAATAACTTACCAAGCAGTTC
CAAGTGAAGTACCCAGTGAGGAACCTAAAGTTGCAACAGCTTATAGACCCCCAGCTTTAAGAAATAAACCAATCACCAAT
TCCAAATTGCATGAAGAGGAACCACCTCAGAATATGAAATCACAATCAGGAAATGATAAGCCATTATCAAAAACAGCTCT
TAAAAATCAAAGGAAGCATGAAGCTAAGAAAGCCGCAAAGCAGGAAGCAAGAAGTGACAAGAGTCCAGATTTGGCACCTA
CTCCTGCCCCACAGAGCACACCACGAAACACTATCTCTCAGTCAATTTCTGGGGACCCTGAGATAGACAAAAAAATCAAG
AACCTAAAGAAGAAACTGAAAGCAATTGAACAACTGAAAGAACAAGCAGCAACTGGAAAACAGCTAGAAAAAAATCAGTT
GGAGAAAATTCAGAAAGAAACAGCCCTTCTCCAGGAGCTGGAAGATTTGGAATTGGGTATTTAA

Library Parental gene expression (RPM)
SRP007412_brain 45 .83 RPM
SRP007412_brain_prefrontal_cortex 28 .80 RPM
SRP007412_cerebellum 56 .63 RPM
SRP007412_heart 30 .91 RPM
SRP007412_kidney 43 .54 RPM
SRP007412_liver 18 .09 RPM
SRP007412_testis 15 .49 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000001199 ortholog_one2one 1 retrogene
retro_cjac_968,
Dasypus novemcinctus ENSDNOG00000014002 ortholog_one2one 1 retrogene
retro_dnov_1148,
Homo sapiens ENSG00000144895 ortholog_one2one 1 retrogene
retro_hsap_565,
Gorilla gorilla ENSGGOG00000015391 ortholog_one2one 1 retrogene
retro_ggor_509,
Loxodonta africana ENSLAFG00000003767 ortholog_one2one 1 retrogene
retro_lafr_502,
Nomascus leucogenys ENSNLEG00000003219 ortholog_one2one 1 retrogene
retro_nleu_2213,
Oryctolagus cuniculus ENSOCUG00000016095 ortholog_one2one 3 retrogenes
retro_ocun_1771, retro_ocun_1825, retro_ocun_1861,
Pongo abelii ENSPPYG00000029636 ortholog_one2one 2 retrogenes
retro_pabe_517, retro_pabe_652,
Pan troglodytes ENSPTRG00000015528 ortholog_one2one 1 retrogene
retro_ptro_423,
Ictidomys tridecemlineatus ENSSTOG00000003374 ortholog_one2one 1 retrogene
retro_itri_1706,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_2395 64.38 90.94
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Download FASTA sequences of all ENSMMUG00000017696 retrocopies