Parental gene:

DCAF12, ENSMMUG00000017458

Aliases:DCAF12, WDR40A
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:15:43397168..43444622(+)


>ENSMMUG00000017458
ATGGCCCGGAAAGCAGTTAGCAGGAAGCGGAAAGCGCCCGCCTCGCCGGGAGCTGGGAGCGACGCTCAGGGCCAGCAGTT
TGGCTGGGATCACACGCTTCACAAAAGGAAAAGACTTCCTCCTGTGAAGAGATCCTTAGTATACTACTTGAAGAACCGGG
AAGTCAGGCTACAGAATGAAACCAGCTACTCTCGAGTGTTGCATGGTTATGCAGCACAGCAACTTCCCAGTCTCCTGAAG
GAGAGAGAGTTTCACCTTGGGACCCTTAATAAAGTGTTTGCATCTCAGTGGTTGAATCATAGGCAAGTGGTGTGTGGCAC
AAAATGCAACACGCTATTTGTAGTAGATGTCCAGACAAGCCAGATCACCAAGATCCCAATTCTGAAAGACCGGGAACCTG
GAGGTGTGACCCAGCAGGGCTGTGGTATCCATGCCATCGAGCTGAATCCTTCTAGAACCCTGCTAGCCACTGGAGGAGAC
AACCCCAACAGTCTTGCCATCTATCGACTACCTACACTGGATCCTGTGTGTGTAGGAGATGATGGACACAAGGACTGGAT
CTTTTCCATCGCATGGATCAGCGACACTATGGCAGTGTCGGGCTCACGTGATGGTTCTATGGGACTCTGGGAGGTGACAG
ATGATGTTTTGACCAAAAGTGATGCAAGACACAGTGTGTCGCGGGTCCCTGTGTATGCACACATCACTCACAAGGCCTTA
AAGGACATCCCCAAAGAGGACACAAACCCTGACAACTGCAAAGTTCGGGCTCTGGCCTTCAACAGCAAGAACAAGGAATT
GGGAGCAGTGTCTCTGGATGGCTACTTTCATCTCTGGAAGGCTGAAAATACACTATCTAAGCTCCTCTCCACCAAACTGC
CATATTGCCGTGAGAACGTGTGTCTGGCCTATGGTAGTGAATGGTCAGTGTATGCAGTGGGCTCCCAAGCTCATGTCTCC
TTCTTGGATCCACGGCAGCCATCATACAATGTCAAGTCTGTCTGTTCCAGGGAGCGAGGCAGTGGAATCCGGTCCGTGAG
TTTCTATGAGCACATCATCACTGTGGGAACTGGGCAGGGCTCCCTGCTGTTCTATGACATCCGAGCTCAGAGATTTCTGG
AAGAGAGGCTCTCAGCTTGTTATGGGTCCAAGCCCAGACTAGCAGGGGAGAATCTGAAACTAACCACTGGCAAAGGCTGG
CTGAACCATGATGAAACCTGGAGGAATTACTTTTCAGACATTGACTTCTTCCCCAATGCTGTTTACACCCACTGCTACGA
CTCGTCTGGAACGAAACTCTTTGTGGCAGGAGGTCCCCTCCCTTCAGGGCTCCATGGAAACTATGCTGGGCTCTGGAGTT
AA

Library Parental gene expression (RPM)
SRP007412_brain 14 .01 RPM
SRP007412_brain_prefrontal_cortex 15 .95 RPM
SRP007412_cerebellum 20 .86 RPM
SRP007412_heart 11 .78 RPM
SRP007412_kidney 27 .58 RPM
SRP007412_liver 16 .15 RPM
SRP007412_testis 161 .89 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000309 ortholog_one2one 1 retrogene
retro_amel_73,
Bos taurus ENSBTAG00000021573 ortholog_one2one 3 retrogenes
retro_btau_1794, retro_btau_1795, retro_btau_1796,
Equus caballus ENSECAG00000023064 ortholog_one2one 2 retrogenes
retro_ecab_1128, retro_ecab_1129,
Erinaceus europaeus ENSEEUG00000013279 ortholog_one2one 1 retrogene
retro_eeur_403,
Microcebus murinus ENSMICG00000005881 ortholog_one2one 1 retrogene
retro_mmur_14,
Nomascus leucogenys ENSNLEG00000004996 ortholog_one2one 1 retrogene
retro_nleu_6,
Otolemur garnettii ENSOGAG00000015799 ortholog_one2one 1 retrogene
retro_ogar_237,
Ochotona princeps ENSOPRG00000001281 ortholog_one2one 2 retrogenes
retro_opri_1178, retro_opri_470,
Pongo abelii ENSPPYG00000019127 ortholog_one2one 1 retrogene
retro_pabe_64,
Pteropus vampyrus ENSPVAG00000008654 ortholog_one2one 1 retrogene
retro_pvam_16,
Sus scrofa ENSSSCG00000010986 ortholog_one2one 1 retrogene
retro_sscr_17,
Ictidomys tridecemlineatus ENSSTOG00000006904 ortholog_one2one 1 retrogene
retro_itri_168,
Tarsius syrichta ENSTSYG00000014394 ortholog_one2one 1 retrogene
retro_tsyr_1965,
Tursiops truncatus ENSTTRG00000010591 ortholog_one2one 1 retrogene
retro_ttru_8,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_202 70.18 85.43
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Download FASTA sequences of all ENSMMUG00000017458 retrocopies