Parental gene:

MMU.895, ENSMMUG00000013973

Aliases:None
Description:T-complex protein 1 subunit delta [Source:UniProtKB/TrEMBL;Acc:F6S025]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:13:62076749..62093801(-)


>ENSMMUG00000013973
GCGGTTGCTGATGCTATTAGAACAAGCCTTGGACCAAAAGGAATGGATAAAATGATTCAAGATGGAAAAGGTGATGTAAC
CATTACAAATGATGGTGCTACCATTCTGAAACAAATGCAAGTGTTACATCCAGCAGCCAGAATGCTGGTGGAGCTGTCTA
AGGCTCAAGATATAGAAGCAGGGGATGGCACCACATCAGTAGTCATCATTGCTGGCTCCCTCTTAGATTCGTGTACCAAG
CTTCTTCAGAAAGGGATTCATCCAACCATCATTTCTGAGTCATTCCAGAAGGCCCTGGAAAAGGGCATTGAAATCTTGAC
TGACATGTCGCGACCTGTGGAACTGAGTGACAGAGAAACTTTGTTAAATAGTGCAACCACTTCACTGAACTCAAAGGTTG
TTTCTCAGTATTCAAGTCTGCTTTCTCCAATGAGTGTAAATGCAGTGATGAAAGTGATTGACCCAGCCACAGCCACCAGT
GTAGATCTTAGAGATATTAAAATAGTTAAGAAGCTTGGTGGGACAATTGATGACTGTGAGTTGGTGGAAGGGCTGGTTCT
CACCCAAAAAGTATCAAATTCTGGCATAACCAGAGTTGAAAAGGCCAAGATTGGGCTTATTCAGTTTTGCTTATCTGCTC
CCAAAACAGATATGGATAATCAAATAGTGGTTTCTGACTATGCCCAGATGGACCGAGTGCTGCGAGAAGAGAGAGCCTAT
ATTTTAAATTTAGTGAAGCAAATTAAAAAAACAGGATGTAATGTCCTTCTCATACAGAAGTCTATTCTAAGAGATGCTCT
TAGTGATCTTGCATTACACTTTTTGAACAAAATGAAGATTATGGTGATTAAGGATATTGAAAGAGAAGACATTGAATTTA
TTTGTAAGACAATTGGAACCAAGCCAGTTGCTCATATTGACCAATTTACTGCTGACATGCTGGGTTCTGCCGAGTTAGCT
GAGGAGGTCAGTTTAAATGGTTCTGGCAAACTGCTCAAGATTACAGGTTGTGCCAGCCCTGGAAAAACAGTTACAATTGT
TGTTCGTGGTTCTAACAAACTGGTGATTGAAGAAGCAGAGCGCTCCATTCATGATGCCCTATGTGTTATTCGTTGTTTAG
TGAAGAAGAGGGCTCTTATTGCAGGAGGTGGTGCTCCAGAAATAGAGTTGGCCCTACGATTAACTGAATATTCACGAACA
CTGAGTGGTATGGAATCCTACTGCGTTCGTGCTTTTGCAGATGCTATGGAGGTCATTCCATCTACACTAGCTGAAAATGC
CGGCCTGAATCCCATTTCTACAGTAACAGAACTAAGAAACCGGCATGCCCAGGGAGAAAAAACTTCAGGCATTAATGTCC
GAAAGGGTGGTATTTCCAACATTTTGGAGGAACTGGTTGTCCAGCCTCTGTTAGTGTCAGTCAGTGCTCTGACTCTTGCA
ACTGAAACTGTTCGGAGCATTCTGAAAATCGATGATGTGGTAAACACTCGATAA

Library Parental gene expression (RPM)
SRP007412_brain 88 .74 RPM
SRP007412_brain_prefrontal_cortex 78 .14 RPM
SRP007412_cerebellum 82 .14 RPM
SRP007412_heart 45 .64 RPM
SRP007412_kidney 57 .63 RPM
SRP007412_liver 37 .80 RPM
SRP007412_testis 141 .58 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000003083 ortholog_one2one 2 retrogenes
retro_cfam_2093, retro_cfam_590,
Callithrix jacchus ENSCJAG00000008703 ortholog_one2one 1 retrogene
retro_cjac_724,
Equus caballus ENSECAG00000016982 ortholog_one2one 1 retrogene
retro_ecab_148,
Microcebus murinus ENSMICG00000015263 ortholog_one2one 1 retrogene
retro_mmur_344,
Monodelphis domestica ENSMODG00000002882 ortholog_one2one 1 retrogene
retro_mdom_1402,
Otolemur garnettii ENSOGAG00000003974 ortholog_one2one 2 retrogenes
retro_ogar_1041, retro_ogar_1931,
Sorex araneus ENSSARG00000010539 ortholog_one2many 1 retrogene
retro_sara_7,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_2500 63.47 94.97
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Download FASTA sequences of all ENSMMUG00000013973 retrocopies