Parental gene:

RPL31, ENSMMUG00000009873

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:13:100934552..100938218(+)


>ENSMMUG00000009873
ATGGCTCCCGCAAAGAAGGGTGGCGAGAAGAAAAAGGGCCGTTCTGCCATCAACGAGGTGGTGACCCGAGAATACACCAT
CAACATTCACAAGCGCATCCATGGAGTGGGCTTCAAGAAGCGTGCCCCTCGGGCACTCAAAGAGATTCGGAAATTTGCCA
TGAAGGAGATGGGAACTCCAGATGTGCGCATTGATACCAGGCTCAACAAAGCTGTCTGGGCCAAAGGAATAAGGAATGTC
CCATACCGAATCCGTGTGCGGCTGTCCAGAAAACGTAATGAGGATGAAGATTCACCAAATAAGCTCTATACTTTGGTTAC
CTACGTACCTGTTACCACTTTCAAAAGTAAGTTCTCCATCCCATAA

Library Parental gene expression (RPM)
SRP007412_brain 1 .01 RPM
SRP007412_brain_prefrontal_cortex 66 .08 RPM
SRP007412_cerebellum 2 .26 RPM
SRP007412_heart 1 .71 RPM
SRP007412_kidney 1 .29 RPM
SRP007412_liver 0 .75 RPM
SRP007412_testis 0 .57 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000007914 possible_ortholog 1 retrogene
retro_acar_168,
Homo sapiens ENSG00000071082 ortholog_one2many 45 retrogenes
retro_hsap_1026, retro_hsap_1056, retro_hsap_1075, retro_hsap_1102, retro_hsap_1118, retro_hsap_1150, retro_hsap_1217, retro_hsap_1269, retro_hsap_1345, retro_hsap_1527, retro_hsap_1691, retro_hsap_1856, retro_hsap_1865, retro_hsap_1993, retro_hsap_1998, retro_hsap_2215, retro_hsap_2246, retro_hsap_2388, retro_hsap_2470, retro_hsap_2510, retro_hsap_2610, retro_hsap_2615, retro_hsap_2627, retro_hsap_2839, retro_hsap_2921, retro_hsap_2959, retro_hsap_3108, retro_hsap_3325, retro_hsap_3471, retro_hsap_3472, retro_hsap_3525, retro_hsap_3731, retro_hsap_3777, retro_hsap_3788, retro_hsap_3899, retro_hsap_3965, retro_hsap_4070, retro_hsap_4210, retro_hsap_461, retro_hsap_4693, retro_hsap_506, retro_hsap_548, retro_hsap_677, retro_hsap_794, retro_hsap_831,
Gorilla gorilla ENSGGOG00000006432 ortholog_one2many 24 retrogenes
retro_ggor_1047, retro_ggor_113, retro_ggor_1442, retro_ggor_169, retro_ggor_1811, retro_ggor_1839, retro_ggor_192, retro_ggor_1971, retro_ggor_21, retro_ggor_2132, retro_ggor_2383, retro_ggor_2541, retro_ggor_2547, retro_ggor_2625, retro_ggor_2820, retro_ggor_442, retro_ggor_583, retro_ggor_655, retro_ggor_834, retro_ggor_84, retro_ggor_849, retro_ggor_874, retro_ggor_88, retro_ggor_997,
Latimeria chalumnae ENSLACG00000013603 ortholog_one2many 1 retrogene
retro_lcha_94,
Macropus eugenii ENSMEUG00000000963 ortholog_one2many 8 retrogenes
retro_meug_1083, retro_meug_1433, retro_meug_1731, retro_meug_1741, retro_meug_198, retro_meug_418, retro_meug_588, retro_meug_649,
Myotis lucifugus ENSMLUG00000002507 possible_ortholog 21 retrogenes
retro_mluc_1072, retro_mluc_1135, retro_mluc_1239, retro_mluc_1301, retro_mluc_1406, retro_mluc_1470, retro_mluc_1666, retro_mluc_1678, retro_mluc_1896, retro_mluc_1913, retro_mluc_2028, retro_mluc_2124, retro_mluc_2126, retro_mluc_269, retro_mluc_303, retro_mluc_463, retro_mluc_767, retro_mluc_782, retro_mluc_914, retro_mluc_922, retro_mluc_997,
Monodelphis domestica ENSMODG00000001704 possible_ortholog 5 retrogenes
retro_mdom_1052, retro_mdom_1464, retro_mdom_1674, retro_mdom_1720, retro_mdom_1818,
Nomascus leucogenys ENSNLEG00000014444 ortholog_one2many 2 retrogenes
retro_nleu_47, retro_nleu_530,
Sarcophilus harrisii ENSSHAG00000011706 possible_ortholog 3 retrogenes
retro_shar_190, retro_shar_285, retro_shar_721,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_340 95.04 100.00
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Download FASTA sequences of all ENSMMUG00000009873 retrocopies