Parental gene:

RPL31, ENSGGOG00000006432

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:2a:98446657..98462497(+)


>ENSGGOG00000006432
ATGGCTCCCGCAAAGAAGGGTGGCGAGAAGAAAAAGGGCCGTTCTGCCATCAACGAAGTGGTAACCCGAGAATACACCAT
CAACATTCACAAGCGTATCCATGGAGTGGGCTTCAAGAAGCGTGCACCTCGGGCACTCAAAGAGATTCGGAAATTTGCCA
TGAAGGAGATGGGAACTCCAGATGTGCGCATTGACACCAGGCTCAACAAAGCTGTCTGGGCCAAAGGAATAAGGAATGTG
CCATACCGAATCCGTGTGCGGCTGTCCAGAAAACGTAATGAGGATGAAGATTCACCAAATAAGCTATATACTTTGGTTAC
CTATGTACCTGTTACCACTTTCAAAAGTCTTCAAAACGATGATCTCTTCAAAACAGATTGTCACCATCAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 115 .33 RPM
SRP007412_cerebellum 89 .63 RPM
SRP007412_heart 55 .72 RPM
SRP007412_kidney 292 .60 RPM
SRP007412_liver 317 .14 RPM
SRP007412_testis 156 .44 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000007914 possible_ortholog 1 retrogene
retro_acar_168,
Homo sapiens ENSG00000071082 ortholog_one2one 45 retrogenes
retro_hsap_1026, retro_hsap_1056, retro_hsap_1075, retro_hsap_1102, retro_hsap_1118, retro_hsap_1150, retro_hsap_1217, retro_hsap_1269, retro_hsap_1345, retro_hsap_1527, retro_hsap_1691, retro_hsap_1856, retro_hsap_1865, retro_hsap_1993, retro_hsap_1998, retro_hsap_2215, retro_hsap_2246, retro_hsap_2388, retro_hsap_2470, retro_hsap_2510, retro_hsap_2610, retro_hsap_2615, retro_hsap_2627, retro_hsap_2839, retro_hsap_2921, retro_hsap_2959, retro_hsap_3108, retro_hsap_3325, retro_hsap_3471, retro_hsap_3472, retro_hsap_3525, retro_hsap_3731, retro_hsap_3777, retro_hsap_3788, retro_hsap_3899, retro_hsap_3965, retro_hsap_4070, retro_hsap_4210, retro_hsap_461, retro_hsap_4693, retro_hsap_506, retro_hsap_548, retro_hsap_677, retro_hsap_794, retro_hsap_831,
Latimeria chalumnae ENSLACG00000013603 ortholog_one2many 1 retrogene
retro_lcha_94,
Macropus eugenii ENSMEUG00000000963 ortholog_one2many 8 retrogenes
retro_meug_1083, retro_meug_1433, retro_meug_1731, retro_meug_1741, retro_meug_198, retro_meug_418, retro_meug_588, retro_meug_649,
Myotis lucifugus ENSMLUG00000002507 possible_ortholog 21 retrogenes
retro_mluc_1072, retro_mluc_1135, retro_mluc_1239, retro_mluc_1301, retro_mluc_1406, retro_mluc_1470, retro_mluc_1666, retro_mluc_1678, retro_mluc_1896, retro_mluc_1913, retro_mluc_2028, retro_mluc_2124, retro_mluc_2126, retro_mluc_269, retro_mluc_303, retro_mluc_463, retro_mluc_767, retro_mluc_782, retro_mluc_914, retro_mluc_922, retro_mluc_997,
Macaca mulatta ENSMMUG00000009873 ortholog_one2many 1 retrogene
retro_mmul_340,
Monodelphis domestica ENSMODG00000001704 possible_ortholog 5 retrogenes
retro_mdom_1052, retro_mdom_1464, retro_mdom_1674, retro_mdom_1720, retro_mdom_1818,
Nomascus leucogenys ENSNLEG00000014444 ortholog_one2one 2 retrogenes
retro_nleu_47, retro_nleu_530,
Sarcophilus harrisii ENSSHAG00000011706 possible_ortholog 3 retrogenes
retro_shar_190, retro_shar_285, retro_shar_721,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_21 84.80 100.00
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2. retro_ggor_84 66.96 92.00
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3. retro_ggor_88 97.60 100.00
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4. retro_ggor_113 88.80 100.00
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5. retro_ggor_169 82.64 96.80
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6. retro_ggor_192 91.20 100.00
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7. retro_ggor_442 88.43 96.00
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8. retro_ggor_583 86.61 100.00
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9. retro_ggor_655 84.92 100.00
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10. retro_ggor_834 92.86 100.00
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11. retro_ggor_849 87.30 100.00
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12. retro_ggor_874 81.51 94.40
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13. retro_ggor_997 58.57 55.20
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14. retro_ggor_1047 90.55 100.00
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15. retro_ggor_1442 62.07 92.00
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16. retro_ggor_1811 77.97 93.60
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17. retro_ggor_1839 81.89 100.00
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18. retro_ggor_1971 84.87 95.20
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19. retro_ggor_2132 88.00 100.00
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20. retro_ggor_2383 87.13 80.80
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21. retro_ggor_2541 83.33 100.00
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22. retro_ggor_2547 78.74 99.20
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23. retro_ggor_2625 83.33 100.00
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24. retro_ggor_2820 76.29 74.62
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Download FASTA sequences of all ENSGGOG00000006432 retrocopies