Parental gene:

MMU.3948, ENSMMUG00000006414

Aliases:None
Description:ATPase family, AAA domain containing 1 [Source:RefSeq peptide;Acc:NP_001244699]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:9:87337185..87395090(-)


>ENSMMUG00000006414
ATGGTACATGCTGAAGCCTTTTCTCGTCCTTTGAGTCGGAATGAAGTTGTTGGTTTAATTTTCCGTTTGACAATATTTGG
TGCAGTGACATACTTTACTATCAAATGGATGGTAGATGCAATTGATCCAACCAGAAAGCAAAAAGTAGAAGCTCAGAAAC
AGGCAGAAAAACTAATGAAGCAAATTGGTGTGAAAAATGTGAAGCTCTCAGAATATGAAATGAGTATTGCTGCTCATCTA
GTAGACCCTCTTAATATGCATGTTACTTGGAGTGATATAGCAGGTTTAGATGATGTCATTACGGATCTGAAAGACACAGT
CATCTTACCTATCAAAAAGAAACATTTGTTTGAGAATTCCAGGCTTCTGCAACCTCCAAAAGGTGTTCTTCTCTATGGGC
CTCCAGGCTGTGGTAAAACGTTGATTGCCAAGGCCACTGCCAAAGAAGCAGGCTGTCGATTTATTAACCTTCAGCCTTCG
ACACTGACCGACAAGTGGTATGGAGAATCTCAAAAATTGGCTGCTGCTGTCTTCTCCCTTGCCATAAAGCTACAACCATC
CATCATCTTTATAGATGAAATAGACTCCTTTCTACGAAACCGTTCAAGTTCTGACCATGAAGCTACAGCCATGATGAAAG
CTCAGTTTATGAGTCTCTGGGATGGATTGGATACTGATCACAGCTGCCAGGTCATAGTAATGGGAGCTACCAATCGTCCT
CAGGACCTTGACTCTGCTATAATGAGAAGAATGCCTACAAGGTTTCACATCAACCAGCCTGCTTTAAAACAGAGAGAAGC
AATCCTGAAACTCATCTTGAAAAATGAAAATGTGGATAGGCATGTAGACCTGCTAGAAGTTGCCCAGGAAACTGATGGCT
TTTCAGGAAGTGACCTAAAAGAGATGTGTCGAGATGCTGCCCTCCTCTGTGTTAGAGAATATGTTAATTCTACATCAGAA
GAAAGCCATGATGAAGATGAAATTCGGCCTGTTCAACAGCAGGACCTGCATCGGGCAATTGAAAAGATGAAGAAATCAAA
GGATGCAGCATTTCAGAATGTTTTAACACATGTTTGTTTAGATTAA

Library Parental gene expression (RPM)
SRP007412_brain 17 .93 RPM
SRP007412_brain_prefrontal_cortex 16 .58 RPM
SRP007412_cerebellum 15 .30 RPM
SRP007412_heart 13 .48 RPM
SRP007412_kidney 16 .20 RPM
SRP007412_liver 3 .01 RPM
SRP007412_testis 76 .52 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000005296 ortholog_one2many 1 retrogene
retro_cjac_1101,
Homo sapiens ENSG00000138138 ortholog_one2many 1 retrogene
retro_hsap_1900,
Gorilla gorilla ENSGGOG00000026651 ortholog_one2many 1 retrogene
retro_ggor_1393,
Nomascus leucogenys ENSNLEG00000012135 ortholog_one2many 1 retrogene
retro_nleu_1231,
Oryctolagus cuniculus ENSOCUG00000012082 ortholog_one2many 1 retrogene
retro_ocun_1634,
Pan troglodytes ENSPTRG00000002717 ortholog_one2many 1 retrogene
retro_ptro_1255,
Pteropus vampyrus ENSPVAG00000014020 ortholog_one2many 1 retrogene
retro_pvam_1080,
Rattus norvegicus ENSRNOG00000010861 ortholog_one2many 1 retrogene
retro_rnor_2752,
Ictidomys tridecemlineatus ENSSTOG00000006563 ortholog_one2many 1 retrogene
retro_itri_309,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_608 97.09 75.90
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Download FASTA sequences of all ENSMMUG00000006414 retrocopies