Parental gene:

EEF1A2, ENSMEUG00000005018

Aliases:None
Description:eukaryotic translation elongation factor 1 alpha 2 [Source:HGNC Symbol;Acc:3192]
Organism:Wallaby (Macropus eugenii)
Coordinates:GeneScaffold_1719:6449..28871(-)


>ENSMEUG00000005018
ATGGGTAAGGAGAAGACCCATATCAATATCGTCGTCATTGGCCATGTAGATTCAGGCAAGTCTACTACCACGGGGCACCT
CATCTACAAGTGCGGGGGCATTGACAAGAGGACCATTGAAAAATTTGAGAAGGAGGCTGCAGAGATGGGGAAAGGCTCCT
TTAAGTATGCCTGGGTCCTGGATAAGCTCAAGGCTGAGCGTGAGCGGGGCATCACCATTGACATCTCTCTGTGGAAGTTT
GAGACGACCAAATACTACATCACCATCATTGATGCGCCAGGACACAGGGATTTTATCAAGAACATGATCACAGGAACTTC
CCAGGCTGATTGTGCGGTGCTGATTGTGGCTGCTGGTGTGGGAGAGTTTGAAGCTGGCATCTCCAAAAATGGGCAGACCC
GGGAGCATGCCTTGCTGGCTTACACTCTGGGTGTGAAACAGCTTATTGTGGGGATCAACAAGATGGACTCCACAGAGCCC
CCCTACAGTGAAAAGCGTTATGATGAAATCGTCAAGGAGGTCAGCGCCTACATCAAGAAGATTGGCTACAACCCTGCCAC
AGTCCCCTTTGTGCCCATCTCAGGCTGGCATGGTGACAACATGTTGGAGCCATCCCCAAATATGCCTTGGTTTAAGGGTT
GGAAGGTGGAACGGAAGGAAGGAAATGCCAGTGGTGTATCCCTGCTGGAAGCCTTGGATACCATCCTGCCCCCTACCCGC
CCAACAGACAAACCCTTGCGCCTCCCACTTCAGGATGTCTACAAGATTGGAGGGATTGGAACAGTGCCTGTGGGCCGAGT
GGAGACAGGGATCCTTCGGCCAGGAATGGTGGTGACTTTTGCTCCTGTAAACATCACTACTGAGGTGAAGTCGGTGGAGA
TGCACCATGAGGCCTTAAGTGAGGCCCTTCCTGGAGACAACGTAGGATTCAATGTGAAGAATGTGTCTGTCAAGGACATC
CGCCGTGGCAATGTCTGTGGTGACAGCAAGTCAGATCCTCCCCAGGAAGCTGCTCAGTTCACCTCCCAGGTCATTATCCT
GAACCACCCAGGGCAGATCAGTGCTGGCTACTCGCCTGTCATCGACTGCCACACTGCCCACATTGCCTGCAAGTTTGCTG
AGCTGAAAGAGAAGATTGATCGGCGCTCTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCGCTTTGCCGTGCG
GGACATGAGGCAGACTGTGGCTGTAGGTGTCATCAAGAACGTCGAGAAGAAGAGCGGAGGGGCAGGCAAGGTGACCAAGT
CTGCACAGAAGGCCCAGAAAGCTGGGAAATGA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000013249 possible_ortholog 1 retrogene
retro_cfam_1007,
Equus caballus ENSECAG00000022260 possible_ortholog 1 retrogene
retro_ecab_802,
Latimeria chalumnae ENSLACG00000002952 possible_ortholog 1 retrogene
retro_lcha_39,
Loxodonta africana ENSLAFG00000028081 possible_ortholog 1 retrogene
retro_lafr_651,
Myotis lucifugus ENSMLUG00000016760 ortholog_one2one 1 retrogene
retro_mluc_1250,
Mustela putorius furo ENSMPUG00000008289 ortholog_one2one 3 retrogenes
retro_mputfur_1030, retro_mputfur_609, retro_mputfur_761,
Nomascus leucogenys ENSNLEG00000010060 ortholog_one2one 2 retrogenes
retro_nleu_11, retro_nleu_1489,
Ornithorhynchus anatinus ENSOANG00000004908 ortholog_one2one 1 retrogene
retro_oana_73,
Otolemur garnettii ENSOGAG00000004630 ortholog_one2one 8 retrogenes
retro_ogar_1067, retro_ogar_2034, retro_ogar_2329, retro_ogar_2497, retro_ogar_2583, retro_ogar_3191, retro_ogar_3270, retro_ogar_643,
Ictidomys tridecemlineatus ENSSTOG00000028862 ortholog_one2one 1 retrogene
retro_itri_1028,
Tursiops truncatus ENSTTRG00000001835 ortholog_one2one 1 retrogene
retro_ttru_993,
Drosophila melanogaster FBgn0000557 ortholog_many2many 1 retrogene
retro_dmel_9,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_meug_110 52.78 69.55
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2. retro_meug_135 88.13 59.83
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3. retro_meug_316 73.13 82.94
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4. retro_meug_601 79.43 82.72
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5. retro_meug_755 75.54 50.11
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6. retro_meug_792 78.15 51.19
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7. retro_meug_850 80.77 50.32
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8. retro_meug_920 72.28 57.45
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9. retro_meug_1067 76.47 51.19
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10. retro_meug_1160 81.40 82.94
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11. retro_meug_1240 59.50 52.05
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12. retro_meug_1334 77.84 71.49
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13. retro_meug_1421 74.60 66.74
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14. retro_meug_1451 77.73 51.19
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15. retro_meug_1465 70.54 51.84
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16. retro_meug_1501 73.91 59.40
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17. retro_meug_1662 79.08 60.48
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18. retro_meug_1690 70.13 82.72
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19. retro_meug_1710 77.43 68.68
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20. retro_meug_1829 78.08 62.63
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21. retro_meug_2023 78.55 65.44
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22. retro_meug_2044 85.36 77.97
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23. retro_meug_2050 84.38 82.94
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Download FASTA sequences of all ENSMEUG00000005018 retrocopies