Parental gene:

MDM2, ENSLAFG00000005885

Aliases:None
Description:None
Organism:Elephant (Loxodonta africana)
Coordinates:scaffold_2:59036999..59064440(+)


>ENSLAFG00000005885
ATGTGCAACACCAACATGTCTGTGTCTACAACCGATGGTGCTGCTGCAAGCACCTCACAGATTCCTGCTTCAGAACAAGA
GACCCTGGTTAGACCAAAGCCGTTGCTTTTGAAGTTGTTGAAGTCTGTTGGTGCCCAAAAAGACACTTACACTATGAAAG
AGGTTATATTTTATCTTGGCCAATATATTATGGCTAAACGATTATATGATGAGAAACAACAACATATGGTATATTGTTCA
AATGATCTTCTAGGGGATTTGTTTGGTGAGCCAAGCTTCTCTGTGAAAGACCACAGGAAAATATATACAATGATCTACAG
AAACTTGGTGGTAGTCAATCAGCAGGAACCATTGGATTCTGGCACATCTGTGAGTGAAAATAGGCGTCAACTTGAGGATG
GGAAAGGTCAAAAGGATTCTGTGCAAGAGTTACAGGAAGAGAAACCTTCATCTTCAAATTTGATTTCTAGACCAACTACC
TCATCTAGAAGGAGAGCAATCAGTGAGACAGAAGAAAATTCAGATGAACTAGCCAGTGAAGGACAAAGAAAGCGCCACAG
ATCTGATAGTGTTTCCCTTTCCTTTGATGAGAGCGTTGCACTGTGTGTAATAAGGGAGATCTGTTGTGAAAGAAGCAGTA
GCAGTGACTCAACAGAAACCCCATCAAATCCGGATCTTGATGCTGGTGTAAGTGAACATTCTGGTGATTGGTTGGACCAG
GATTCAGTTTCAGATCAATTTAGTGTAGAATTTGAAGTTGAATCTCTTGATTCCGAAGATTATAACCTTAGTGAAGAAGG
ACAAGAACTCTCAGATGAAGATGATGAGGTATATCGAGTTACTGTCTATCAGGCAGAGGAGAGTGATACAGATTCATTTG
AAGATGACCCTGAAATTTCCTTAGCTGACTATTGGAAGTGTACTTCATGCAATGAAATGAACCCTCCTCTTCCACCACAT
TGTAACAGATGTTGGACACTTCGTGAGAATTGGCTTCCTGAAGATAAAAGAAAAGATAAAGAGAAAATGCCTGAGAGTGC
TAAACAAGAAAACACAACGCAGGTAGAAGAGGGCTTTGATGTTCCTGATTGTAAAAAAACAACAATGAATGACTCCAAAG
AGTCATGTGTTGAGGAAAATGATGATAAAATAAAACAAGCCTCCCATTCTCAAGAAGGTGAGGACTATTCTCAGCCATCA
ACTTCCAGTAGCATCATTTATAGCAGCCAAGATGCTAGAGAGTCTGAGAGGGAAGAAACTCAAGGCAAAGATGAAAGTGT
GGAATCTAGATATCGCCCCATTGCCACTGAACCATGTGTGATTTGCCAAGATCGACCTAAAAATGGTTGCATCGTCCACG
GCAAAACAGGACATCTTATGGCATGCTTTACATGTGCAAAGAAGCTAAAAAAAAGAAATAAGCCCTGTCCAGTATGTAGA
CAACCAATTCAAATGATTGTGTTAACTTATTTCCTCTAG

Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000004323 ortholog_one2one 1 retrogene
retro_cpor_1234,
Otolemur garnettii ENSOGAG00000034779 ortholog_one2many 2 retrogenes
retro_ogar_1210, retro_ogar_49,
Ochotona princeps ENSOPRG00000009677 ortholog_one2one 1 retrogene
retro_opri_891,
Ictidomys tridecemlineatus ENSSTOG00000014702 ortholog_one2many 1 retrogene
retro_itri_1731,
Tupaia belangeri ENSTBEG00000013758 ortholog_one2one 2 retrogenes
retro_tbel_3216, retro_tbel_915,
Tarsius syrichta ENSTSYG00000002908 ortholog_one2one 2 retrogenes
retro_tsyr_1343, retro_tsyr_984,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lafr_715 74.82 83.13
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Download FASTA sequences of all ENSLAFG00000005885 retrocopies