Parental gene:

MDM2, ENSTBEG00000013758

Aliases:None
Description:MDM2 oncogene, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:6973]
Organism:Treeshrew (Tupaia belangeri)
Coordinates:GeneScaffold_2072:305743..338035(+)


>ENSTBEG00000013758
ATGTGCAATACCAATATGTCTGTGTCTACTGATGGTGCTGGAGGCACCTCACAGATTCCAGCTTCGGAACAGGAGACCCT
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNAATCATCAGACACAGGCTTATCTGTGAATGAGAACAAGTGTCACCTTGAAGGTGGGAGTG
ATCAGAAGGACCCTGTGCAAGAGCCACAGGAAGAGAAACCCTCATCTTCAAATTCGATTTCTAGACCATCTACCTCATCT
AGAAGGAGAACGATTAGTGAGACAGGAGAAAATTCAGAGGAATCATCTGGTGAACAACAAAGGAAACGCCATAGATCTGA
TAGTATCTCCCTCTCCTTTGATGAAAGCCTGGCTCTGTGTGTAGTAAGGGAGCTGTGTTGTGAAAGAAGCAGCAGCAGTG
AATCTACAGGGACTCCCTCAGAACCGCTCAGTGAAGAAGGACAAGAACTCTCAGATGAAGATGATGAGGTGTATCGAGTT
ACTGTGTATCAGGCAGGGGAGAGTGATACTGATTCATTTGAAGATGACCCTGAAATTTCCTTAGCTGACTATTGGAAATG
TACTTCATGCAATGAGATGAACCCTCCCCTTCCACCACACTGCAACAGATGTTGGGCTCTTCGTGAGAATTGGCTTCCTG
AAGATAAAGGGAAGGATAAAGGGGAAATCCCTGAAAAAAACAAATTAGAAAACCCAACACGAGCAGAAGAGGGGTTTGAT
GTTCCTGACTGTAAAAAAACTCCAGTGAATGATTCCAAAGAGTCACGTGGTGAAGAAAATGATGATAAAATTACACAAGC
CTCCCTGTCACAAGGAAGTGAGGACTATTCTCAGCCATCAACTTCTAATAGCATTATTTGTAGCAGCCAAGATGATGTCA
AAGAGTTTGGGAGGGAAGAAACACAAGACAAAGAAGAAAGTATGGAATCTAGTTTTCCCCTTAATGCCATTGAACCTTGT
GTGATTTGCCAGGGTCGACCTAAAAATGGTTGCATTGTCCATGGCAAAACAGGACATCTTATGGCATGCTTTACATGTGC
GAAGAAGCTAAAGAAAAGGAATAAGCCCTGCCCAGTGTGTAGACAACCAATTCAATTAATTGTGCTAACTTATTTCCCCT
AG

Species Parental gene accession Homology type Retrogenes number
Loxodonta africana ENSLAFG00000005885 ortholog_one2one 1 retrogene
retro_lafr_715,
Otolemur garnettii ENSOGAG00000034779 possible_ortholog 2 retrogenes
retro_ogar_1210, retro_ogar_49,
Ochotona princeps ENSOPRG00000009677 ortholog_one2one 1 retrogene
retro_opri_891,
Ictidomys tridecemlineatus ENSSTOG00000014702 possible_ortholog 1 retrogene
retro_itri_1731,
Tarsius syrichta ENSTSYG00000002908 ortholog_one2one 2 retrogenes
retro_tsyr_1343, retro_tsyr_984,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_915 86.12 52.98
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2. retro_tbel_3216 74.03 50.11
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Download FASTA sequences of all ENSTBEG00000013758 retrocopies