Parental gene:

SHQ1, ENSGGOG00000034818

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:3:74494827..74595748(-)


>ENSGGOG00000034818
ATGCTAACCCCGGCGTTCGACCTCAGCCAGGATCCGGACTTCCTGACTATCGCCATCCGCGTGCCCTACGCCCGGGTCTC
CGAGTTCGACGTCTACTTCGAGGGGTCTGACTTCAAGTTCTACGCCAAGCCATACTTTCTCAGATTAACCCTTCCTGGAA
GAATTGTAGAAAATGGAAGCGAGCAAGGGTCCTATGATGCAGATAAAGGAATTTTTACCATTCGCCTGCCCAAAGAAACC
CCTGGCCAGCATTTTGAGGGGCTGAACATGTTAACTGCTCTTCTGGCACCAAGAAAATCCAGGACAGCAAAACCACTTGT
GGAAGAAATAGTTGCTTCTGAGATTCCTGAGGAAGTAGTTGACGATGAAGAGTTTGATTGGGAAATTGAGCAGACACCCT
ATGAAGAGGTATCAGAAAGTGCTTTGAATCCGCAGTGCCACTATGGATTTGGAAACTTACGATCAGGAGTGTTGCAGCGG
TTACAGGATGAACTGAGTGATGTTGTTGATATTAAGGATCCAGATTTCACCCCTGCAGCTGAACGAAGACAGAAGCGCCT
GGCCACTGAGCTGGCCAAGTTTGATCCTGATCATTATCTAGCTGACTTTTTTGAAGACGAGGCAATTGAACAGATTTTGA
AGTATAATCCTTGGTGGACTGACAAATATTCAAAAATGACGGCCTTTTTGGAAAAGAGTCAGGAACAAGAAAATCATGCT
ACATTAGTGTCTTTTTCTGAAGAAGAGAAATATCAGCTACGAAAATTTGTCAATAAATCTTATCTGCTGGACAAGAGAGC
CTGTCGTCAAGTGTGCTACAGTTTGATTGATATCCTTCTGGCATATTGCTATGAAACCCGTGTCACTGAAGGAGAGAAGA
ATGTTGAATCTGCATGGAATATCAGGAAACTGAGTCCAACACTATGCTGGTTTGAGACTTGGACTAACGTTCATGATATC
GTGGTGTCTTTTGGAAGAAGGGTGTTGTGTTACCCACTCTATCGCCATTTCAAGCTGGTGATGAAGGCCTACAGGGACAC
TATAAAGATATTGCAACTGGGTAAAAGTGCAGTTTTAAAGTGTCTCCTGGATATTCACAAAATTTTTCAGGAAAATGACC
CAGCGTACATACTGAATGATCTCTACATCTCAGACTACTGTGTGTGGATTCAGAAAGTCAAATCCAAAAAGTTGGCAGCT
CTTGCAGAAGCCTTAAAGGAAGTCTCCCTTACAAAGGCCCAGCTGGGGTTAGAACTGGAAGAACTAGAAGCAGCAGCATT
GCTTGTCCAGGAGGAAGAAACTGCATTAAAAGCAGCCCATTCAGTTTCTGGGCAGCAGACACTTTGCTCCAGCTCTGAGG
CAAGTGATTCGGAGGACTCAGACAGCACCGTGTCATCTGGAAACGAAGACTCAGGCTCAGATTCAGAACAAGATGAACTC
AAAGATAGTCCATCTGAGACAGTCAATTCTTTGCAAGGTCCCTTTCTTGAAGAAAGCAGTGCCCTTCTTATTGTTGATGG
TGGAGTACGCAGAAACACAGCCATCCAGGAGTCTGATGCCAGTCAAGGAAAGCCACTTTCCTCTTCCTGGCCTCTTGGAG
TGTCTGGGCCTCTGATAGAGGAGCTTGGGGAACAACTGAAGACTACAGTTCAGGTTTCTGAACCCAAGGGCACCACTGCT
GTAAACCGCAGCAATATGCAGGAGAGAGACGGCTGTCAGACACCAAATAATTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 8 .20 RPM
SRP007412_cerebellum 7 .92 RPM
SRP007412_heart 2 .53 RPM
SRP007412_kidney 14 .88 RPM
SRP007412_liver 9 .63 RPM
SRP007412_testis 20 .72 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000015131 ortholog_one2one 1 retrogene
retro_cjac_1045,
Homo sapiens ENSG00000144736 ortholog_one2one 1 retrogene
retro_hsap_674,
Nomascus leucogenys ENSNLEG00000002731 ortholog_one2one 1 retrogene
retro_nleu_463,
Pongo abelii ENSPPYG00000013717 ortholog_one2one 1 retrogene
retro_pabe_546,
Pan troglodytes ENSPTRG00000015106 ortholog_one2one 1 retrogene
retro_ptro_486,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_581 85.34 99.83
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSGGOG00000034818 retrocopies