Parental gene:

ANP32A, ENSGGOG00000015417

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:15:48132871..48176263(-)


>ENSGGOG00000015417
ATGGAGATGGGCAGACGGATTCATTTAGAGCTGCGGAACAGGACGCCCTCTGATGTGAAAGAACTTGTCCTGGACAACAG
TCGGTCGAATGAAGGCAAACTCGAAGGCCTCACAGATGAATTTGAAGAACTGGAATTCTTAAGTACAATCAACGTAGGCC
TCACCTCAATCGCAAACTTACCAAAGTTAAACAAACTTAAGAAGCTTGAACTAAGCGATAACAGAGTCTCAGGGGGCCTG
GAAGTATTGGCAGAAAAGTGTCCGAACCTCACGCATCTAAATTTAAGTGGCAACAAAATTAAAGACCTCAGCACAATAGA
GCCACTGAAAAAGTTAGAAAACCTCAAGAGCTTAGACCTTTTCAATTGCGAGGTAACCAACCTGAACGACTACCGAGAAA
ATGTGTTCAAGCTCCTCCCGCAACTCACATATCTCGACGGCTATGACCGGGACGACAAGGAGGCCCCTGACTCGGATGCT
GAGGGCTACGTGGAGGGCCTGGATGATGAGGAGGAGGATGAGGATGAGGAGGAGTATGATGAAGATGCTCAGGTAGTGGA
AGACGAGGAGGACGAGGATGAGGAGGAGGAAGGTGAAGAGGAGGACGTGAGTGGAGAGGAGGAGGAGGATGAAGAAGGTT
ATAACGATGGAGAGGTAGATGACGAGGAAGAGGAAGAAGAGCTTGGTGAAGAAGAAAGGGGTCAGAAGCGAAAACGAGAA
CCTGAAGATGAGGGAGAAGATGATGACTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 96 .68 RPM
SRP007412_cerebellum 130 .33 RPM
SRP007412_heart 63 .82 RPM
SRP007412_kidney 107 .09 RPM
SRP007412_liver 49 .83 RPM
SRP007412_testis 36 .57 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000002339 ortholog_one2one 2 retrogenes
retro_cjac_3305, retro_cjac_3799,
Dasypus novemcinctus ENSDNOG00000015360 possible_ortholog 5 retrogenes
retro_dnov_1199, retro_dnov_1250, retro_dnov_1696, retro_dnov_836, retro_dnov_956,
Dipodomys ordii ENSDORG00000008611 ortholog_one2many 1 retrogene
retro_dord_240,
Felis catus ENSFCAG00000015773 possible_ortholog 1 retrogene
retro_fcat_1188,
Homo sapiens ENSG00000140350 ortholog_one2one 3 retrogenes
retro_hsap_1479, retro_hsap_3117, retro_hsap_48,
Loxodonta africana ENSLAFG00000022560 ortholog_one2many 1 retrogene
retro_lafr_679,
Nomascus leucogenys ENSNLEG00000013347 ortholog_one2one 2 retrogenes
retro_nleu_15, retro_nleu_2383,
Otolemur garnettii ENSOGAG00000003058 possible_ortholog 1 retrogene
retro_ogar_2596,
Ochotona princeps ENSOPRG00000015394 possible_ortholog 2 retrogenes
retro_opri_302, retro_opri_563,
Pan troglodytes ENSPTRG00000007219 ortholog_one2one 2 retrogenes
retro_ptro_2108, retro_ptro_758,
Rattus norvegicus ENSRNOG00000045651 possible_ortholog 1 retrogene
retro_rnor_1043,
Sarcophilus harrisii ENSSHAG00000010906 ortholog_one2many 1 retrogene
retro_shar_540,
Tupaia belangeri ENSTBEG00000016417 possible_ortholog 2 retrogenes
retro_tbel_4078, retro_tbel_4595,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_1134 81.08 74.30
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Download FASTA sequences of all ENSGGOG00000015417 retrocopies