Parental gene:

DUXA, ENSGGOG00000005650

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:19:54713663..54726888(-)


>ENSGGOG00000005650
ATGGCCGAAGACACCTATTCACACAAGATGGTAAAAACAAATCATAGGCGCTGTCGCACAAAATTCACAGAAGAACAGTT
GAAAATCCTCATCAATACCTTCAATCAAAAGCCTTACCCAGGTTATGCTACCAAACAAAAACTTGCTTTAGAAATCAATA
CAGAAGAGTCCAGAATCCAGATTTGGTTTCAGAATCGAAGAGCTAGGCACGGATTCCAGAAAAGACCAGAAGCTGAGACT
TTAGAATCAAGCCAGAGCCAGGGGCAAGATCAACCTGGTGTGGAGTTTCAAAGTAGAGAAGCCAGACGGTGTCGTACCAC
CTACAGCGCCTCTCAGTTACACACTCTCATCAAGGCATTTATGAAAAACCCATATCCTGGGATTGATTCCAGAGAAGAAC
TTGCTAAAGAAATCGGTGTTCCAGAGTCAAGAGTCCAAATTTGGTTCCAAAATCGAAGATCTAGATTACTTCTCCAGAGA
AAAAGGGAACCTGTGGCGTCCTTAGAACAAGAAGAGCAGGGCAAGATTCCTGAGGGACTGCAAGGTACAGAAGATACACA
AAATGGCACCAACTTCACTAGTGACTCTCATTTCTCTGGAGCCAGAACGTGGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .10 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000025505 ortholog_one2one 1 retrogene
retro_dnov_701,
Felis catus ENSFCAG00000007545 ortholog_one2one 1 retrogene
retro_fcat_1027,
Homo sapiens ENSG00000258873 ortholog_one2one 5 retrogenes
retro_hsap_1525, retro_hsap_2454, retro_hsap_4100, retro_hsap_566, retro_hsap_663,
Loxodonta africana ENSLAFG00000030167 ortholog_one2one 1 retrogene
retro_lafr_996,
Macaca mulatta ENSMMUG00000007788 ortholog_one2one 5 retrogenes
retro_mmul_2157, retro_mmul_2363, retro_mmul_2396, retro_mmul_2441, retro_mmul_636,
Nomascus leucogenys ENSNLEG00000010886 ortholog_one2one 3 retrogenes
retro_nleu_1935, retro_nleu_2214, retro_nleu_568,
Oryctolagus cuniculus ENSOCUG00000011331 ortholog_one2one 1 retrogene
retro_ocun_981,
Pongo abelii ENSPPYG00000010457 ortholog_one2one 8 retrogenes
retro_pabe_1192, retro_pabe_1328, retro_pabe_1805, retro_pabe_3357, retro_pabe_3376, retro_pabe_518, retro_pabe_660, retro_pabe_802,
Pan troglodytes ENSPTRG00000028871 ortholog_one2one 5 retrogenes
retro_ptro_1034, retro_ptro_1418, retro_ptro_2781, retro_ptro_424, retro_ptro_482,
Pteropus vampyrus ENSPVAG00000003020 ortholog_one2one 1 retrogene
retro_pvam_870,
Tupaia belangeri ENSTBEG00000005321 ortholog_one2one 1 retrogene
retro_tbel_3384,
Tarsius syrichta ENSTSYG00000014223 ortholog_one2one 1 retrogene
retro_tsyr_1577,
Tursiops truncatus ENSTTRG00000014200 ortholog_one2one 2 retrogenes
retro_ttru_1277, retro_ttru_1768,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_510 83.17 100.00
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2. retro_ggor_1017 77.17 61.27
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3. retro_ggor_1076 77.17 61.27
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4. retro_ggor_1167 83.90 100.00
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5. retro_ggor_1528 70.63 69.12
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6. retro_ggor_2133 85.33 73.53
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7. retro_ggor_2752 75.12 99.51
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Download FASTA sequences of all ENSGGOG00000005650 retrocopies