Parental gene:

SSX4, ENSG00000204645

Aliases:SSX4, CT5.4
Description:synovial sarcoma, X breakpoint 4 [Source:HGNC Symbol;Acc:11338]
Organism:Human (Homo sapiens)
Coordinates:X:48242862..48252785(+)


>ENSG00000204645
ATGAACGGAGACGACGCCTTTGCAAGGAGACCCAGGGATGATGCTCAAATATCAGAGAAGTTACGAAAGGCCTTCGATGA
TATTGCCAAATACTTCTCTAAGAAAGAGTGGGAAAAGATGAAATCCTCGGAGAAAATCGTCTATGTGTATATGAAGCTAA
ACTATGAGGTCATGACTAAACTAGGTTTCAAGGTCACCCTCCCACCTTTCATGCGTAGTAAACGGGCTGCAGACTTCCAC
GGGAATGATTTTGGTAACGATCGAAACCACAGGAATCAGGTTGAACGTCCTCAGATGACTTTCGGCAGCCTCCAGAGAAT
CTTCCCGAAGATCATGCCCAAGAAGCCAGCAGAGGAAGAAAATGGTTTGAAGGAAGTGCCAGAGGCATCTGGCCCACAAA
ATGATGGGAAACAGCTGTGCCCCCCGGGAAATCCAAGTACCTTGGAGAAGATTAACAAGACATCTGGACCCAAAAGGGGG
AAACATGCCTGGACCCACAGACTGCGTGAGAGAAAGCAGCTGGTGGTTTATGAAGAGATCAGCGACCCTGAGGAAGATGA
CGAGTAA

Library Parental gene expression (RPM)
bodymap2_adipose 0 .00 RPM
bodymap2_adrenal 0 .00 RPM
bodymap2_brain 0 .00 RPM
bodymap2_breast 0 .00 RPM
bodymap2_colon 0 .00 RPM
bodymap2_heart 0 .00 RPM
bodymap2_kidney 0 .00 RPM
bodymap2_liver 0 .00 RPM
bodymap2_lung 0 .00 RPM
bodymap2_lymph_node 0 .00 RPM
bodymap2_ovary 0 .00 RPM
bodymap2_prostate 0 .00 RPM
bodymap2_skeletal_muscle 0 .00 RPM
bodymap2_testis 0 .02 RPM
bodymap2_thyroid 0 .00 RPM
bodymap2_white_blood_cells 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000014776 ortholog_one2many 1 retrogene
retro_cjac_2373,
Gorilla gorilla ENSGGOG00000026107 ortholog_one2many 1 retrogene
retro_ggor_2374,
Nomascus leucogenys ENSNLEG00000003504 ortholog_one2many 1 retrogene
retro_nleu_482,
Ictidomys tridecemlineatus ENSSTOG00000015375 ortholog_one2many 3 retrogenes
retro_itri_1394, retro_itri_1855, retro_itri_746,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3512 69.47 100.00
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Download FASTA sequences of all ENSG00000204645 retrocopies