Parental gene: | NT5DC1, ENSG00000178425 |
| Aliases: | None |
| Description: | 5'-nucleotidase domain containing 1 [Source:HGNC Symbol;Acc:21556] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 6:116422011..116570660(+) |
>ENSG00000178425
ATGGCTCAGCACTTCTCCCTGGCCGCCTGCGACGTGGTCGGATTCGACCTGGACCACACTCTGTGTCGCTACAACCTGCC
CGAGAGCGCCCCGCTCATTTATAATAGCTTTGCCCAGTTCCTAGTTAAGGAGAAAGGGTACGATAAGGAATTGCTCAATG
TGACCCCAGAGGATTGGGATTTCTGTTGCAAAGGTTTGGCATTGGATCTAGAAGATGGGAACTTCCTTAAACTTGCAAAT
AATGGCACTGTTCTCAGGGCAAGCCATGGCACCAAGATGATGACTCCAGAGGTGCTGGCAGAGGCATATGGCAAGAAAGA
GTGGAAGCACTTCTTGTCGGACACTGGAATGGCTTGCCGCTCAGGAAAGTATTACTTTTACGACAACTACTTTGACCTGC
CAGGAGCTCTTCTGTGTGCCAGGGTGGTGGACTATTTAACAAAACTGAACAATGGTCAAAAAACATTTGATTTTTGGAAG
GATATAGTTGCTGCTATACAACACAATTATAAAATGTCAGCTTTTAAGGAAAACTGTGGAATATATTTTCCAGAAATAAA
AAGAGATCCAGGCAGATATTTACATAGTTGTCCTGAATCTGTGAAAAAATGGCTTCGACAGCTAAAGAATGCTGGGAAAA
TTCTTCTGTTAATTACCAGTTCTCACAGTGATTACTGTAGACTTCTCTGCGAATATATTCTTGGGAATGATTTTACAGAC
CTTTTTGACATTGTGATTACAAATGCATTGAAGCCTGGTTTCTTCTCCCACTTACCAAGTCAGAGACCTTTCCGGACACT
CGAGAATGATGAGGAGCAGGAGGCACTGCCATCTCTGGATAAACCTGGCTGGTACTCCCAAGGGAACGCTGTCCACCTCT
ATGAACTTCTGAAGAAAATGACTGGCAAACCTGAACCCAAGGTTGTTTATTTTGGTGACAGCATGCATTCAGATATTTTC
CCAGCTCGTCACTATAGTAATTGGGAGACAGTCCTCATCCTGGAAGAACTCAGAGGGGATGAAGGCACGAGGAGTCAGAG
GCCTGAGGAGTCAGAGCCTCTAGAGAAGAAAGGAAAATATGAGGGACCAAAAGCAAAACCTTTAAATACTTCATCTAAAA
AATGGGGCTCTTTTTTTATTGATTCAGTTTTGGGACTGGAAAATACAGAAGACTCCTTGGTTTATACATGGTCTTGTAAG
AGAATCAGTACTTACAGCACTATTGCAATTCCAAGTATTGAAGCAATCGCAGAATTACCTCTGGACTACAAATTTACAAG
ATTCTCTTCAAGCAATTCAAAAACAGCTGGCTACTATCCAAATCCTCCACTGGTCTTATCAAGTGATGAGACACTGATAT
CCAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_adipose | 29 .52 RPM |
| bodymap2_adrenal | 47 .39 RPM |
| bodymap2_brain | 52 .58 RPM |
| bodymap2_breast | 42 .08 RPM |
| bodymap2_colon | 32 .56 RPM |
| bodymap2_heart | 54 .46 RPM |
| bodymap2_kidney | 48 .45 RPM |
| bodymap2_liver | 25 .92 RPM |
| bodymap2_lung | 25 .37 RPM |
| bodymap2_lymph_node | 30 .92 RPM |
| bodymap2_ovary | 37 .78 RPM |
| bodymap2_prostate | 55 .10 RPM |
| bodymap2_skeletal_muscle | 37 .45 RPM |
| bodymap2_testis | 48 .51 RPM |
| bodymap2_thyroid | 56 .72 RPM |
| bodymap2_white_blood_cells | 47 .39 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Myotis lucifugus | ENSMLUG00000008313 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000013080 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000016943 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000018523 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_4759 | 90.79 | 82.86 | Please wait, loading  |
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Download FASTA sequences of all ENSG00000178425 retrocopies