Parental gene: | CASC4, ENSG00000166734 |
| Aliases: | CASC4, H63 |
| Description: | cancer susceptibility candidate 4 [Source:HGNC Symbol;Acc:24892] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 15:44580926..44707956(+) |
>ENSG00000166734
ATGGTGGGTTTCGGGGCCAACCGGCGGGCTGGCCGCCTGCCCTCTCTCGTGCTGGTGGTGCTGCTGGTGGTGATCGTCGT
CCTCGCCTTCAACTACTGGAGCATCTCCTCCCGCCACGTCCTGCTTCAGGAGGAGGTGGCCGAGCTGCAGGGCCAGGTCC
AGCGCACCGAAGTGGCCCGCGGGCGGCTGGAAAAGCGCAATTCGGACCTCTTGCTGTTGGTGGACACGCACAAGAAACAG
ATCGACCAGAAGGAGGCCGACTACGGCCGCCTCAGCAGCCGGCTGCAGGCCAGAGAGGGCCTCGGGAAGAGATGCGAGGA
TGACAAGGTTAAACTACAGAACAACATATCGTATCAGATGGCAGACATACATCATTTAAAGGAGCAACTTGCTGAGCTTC
GTCAGGAATTTCTTCGACAAGAAGACCAGCTTCAGGACTATAGGAAGAACAATACTTACCTTGTGAAGAGGTTAGAATAT
GAAAGTTTTCAGTGTGGACAGCAGATGAAGGAATTGAGAGCACAGCATGAAGAAAATATTAAAAAGTTAGCAGACCAGTT
TTTAGAGGAACAAAAGCAAGAGACCCAAAAGATTCAATCAAATGATGGAAAGGAATTGGATATAAACAATCAAGTAGTAC
CTAAAAATATTCCAAAAGTAGCTGAGAATGTTGCAGATAAGAATGAAGAACCCTCAAGCAATCATATTCCACATGGGAAA
GAACAAATCAAAAGAGGTGGTGATGCAGGGATGCCTGGAATAGAAGAGAATGACCTAGCAAAAGTTGATGATCTTCCCCC
TGCTTTAAGGAAGCCTCCTATTTCAGTTTCTCAACATGAAAGTCATCAAGCAATCTCCCATCTTCCAACTGGACAACCTC
TCTCCCCAAATATGCCTCCAGATTCACACATAAACCACAATGGAAACCCCGGTACTTCAAAACAGAATCCTTCCAGTCCT
CTTCAGCGTTTAATTCCAGGCTCAAACTTGGACAGTGAACCCAGAATTCAAACAGATATACTAAAGCAGGCTACCAAGGA
CAGAGTCAGTGATTTCCATAAATTGAAGCAAAGCCGATTCTTTGATGAAAATGAATCCCCTGTTGATCCGCAGCATGGCT
CTAAACTGGCGGATTATAATGGGGATGATGGTAACGTAGGTGAGTATGAGGCAGACAAGCAGGCTGAGCTGGCTTACAAT
GAGGAAGAAGATGGTGATGGTGGAGAGGAAGACGTCCAAGATGATGAAGAACGAGAGCTTCAAATGGATCCTGCAGACTA
TGGAAAGCAACATTTCAATGATGTCCTTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_adipose | 124 .61 RPM |
| bodymap2_adrenal | 92 .32 RPM |
| bodymap2_brain | 203 .79 RPM |
| bodymap2_breast | 145 .39 RPM |
| bodymap2_colon | 149 .41 RPM |
| bodymap2_heart | 45 .14 RPM |
| bodymap2_kidney | 160 .50 RPM |
| bodymap2_liver | 98 .99 RPM |
| bodymap2_lung | 169 .08 RPM |
| bodymap2_lymph_node | 129 .74 RPM |
| bodymap2_ovary | 232 .83 RPM |
| bodymap2_prostate | 163 .10 RPM |
| bodymap2_skeletal_muscle | 53 .29 RPM |
| bodymap2_testis | 180 .14 RPM |
| bodymap2_thyroid | 210 .74 RPM |
| bodymap2_white_blood_cells | 149 .69 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000006998 | ortholog_one2one | 4 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000005533 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000005362 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000006428 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000007010 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_1238 | 90.13 | 69.72 | Please wait, loading  |
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Download FASTA sequences of all ENSG00000166734 retrocopies