Parental gene:

MESDC2, ENSG00000117899

Aliases:MESDC2, BOCA, MESD
Description:mesoderm development candidate 2 [Source:HGNC Symbol;Acc:13520]
Organism:Human (Homo sapiens)
Coordinates:15:81239666..81282219(-)


>ENSG00000117899
ATGGCGGCTTCCAGGTGGGCGCGCAAGGCCGTGGTCCTGCTTTGTGCCTCTGACCTGCTGCTGCTGCTGCTACTGCTACC
ACCGCCTGGGTCCTGCGCGGCCGAAGGCTCGCCCGGGACGCCCGACGAGTCTACCCCACCTCCCCGGAAGAAGAAGAAGG
ATATTCGCGATTACAATGATGCAGACATGGCGCGTCTTCTGGAGCAATGGGAGAAAGATGATGACATTGAAGAAGGAGAT
CTTCCAGAGCACAAGAGACCTTCAGCACCTGTCGACTTCTCAAAGATAGACCCAAGCAAGCCTGAAAGCATATTGAAAAT
GACGAAAAAAGGGAAGACTCTCATGATGTTTGTCACTGTATCAGGAAGCCCTACTGAGAAGGAGACAGAGGAAATTACGA
GCCTCTGGCAGGGCAGCCTTTTCAATGCCAACTATGACGTCCAGAGGTTCATTGTGGGATCAGACCGTGCTATCTTCATG
CTTCGCGATGGGAGCTACGCCTGGGAGATCAAGGACTTTTTGGTCGGTCAAGACAGGTGTGCTGATGTAACTCTGGAGGG
CCAGGTGTACCCCGGCAAAGGAGGAGGAAGCAAAGAGAAAAATAAAACAAAGCAAGACAAGGGCAAAAAAAAGAAGGAAG
GAGATCTGAAATCTCGGTCTTCCAAGGAAGAAAATCGAGCTGGGAATAAAAGAGAAGACCTGTGA

Library Parental gene expression (RPM)
bodymap2_adipose 37 .95 RPM
bodymap2_adrenal 55 .57 RPM
bodymap2_brain 41 .96 RPM
bodymap2_breast 47 .86 RPM
bodymap2_colon 45 .85 RPM
bodymap2_heart 22 .43 RPM
bodymap2_kidney 62 .02 RPM
bodymap2_liver 43 .54 RPM
bodymap2_lung 65 .30 RPM
bodymap2_lymph_node 59 .10 RPM
bodymap2_ovary 70 .55 RPM
bodymap2_prostate 52 .67 RPM
bodymap2_skeletal_muscle 10 .26 RPM
bodymap2_testis 61 .22 RPM
bodymap2_thyroid 97 .83 RPM
bodymap2_white_blood_cells 63 .41 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000007811 ortholog_one2one 1 retrogene
retro_cjac_3285,
Gorilla gorilla ENSGGOG00000027583 ortholog_one2one 1 retrogene
retro_ggor_793,
Loxodonta africana ENSLAFG00000014513 ortholog_one2one 1 retrogene
retro_lafr_505,
Monodelphis domestica ENSMODG00000019402 ortholog_one2many 2 retrogenes
retro_mdom_30, retro_mdom_344,
Oryctolagus cuniculus ENSOCUG00000016290 ortholog_one2one 1 retrogene
retro_ocun_1947,
Pan troglodytes ENSPTRG00000007366 ortholog_one2one 1 retrogene
retro_ptro_759,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_990 61.21 69.23
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Download FASTA sequences of all ENSG00000117899 retrocopies