Parental gene:

LRRC59, ENSG00000108829

Aliases:LRRC59, p34
Description:leucine rich repeat containing 59 [Source:HGNC Symbol;Acc:28817]
Organism:Human (Homo sapiens)
Coordinates:17:48452419..48474914(-)


>ENSG00000108829
ATGACCAAGGCCGGTAGCAAGGGCGGGAACCTCCGCGACAAGCTGGACGGCAACGAACTGGACCTGAGCCTCAGCGACCT
GAATGAGGTCCCGGTGAAGGAGCTGGCTGCCCTTCCAAAGGCCACCATCCTGGATCTGTCTTGTAATAAACTGACTACTC
TACCGTCGGATTTCTGTGGCCTCACACACCTGGTGAAGCTAGACCTGAGTAAGAACAAGCTGCAGCAGCTGCCAGCAGAC
TTTGGCCGTCTGGTCAACCTCCAGCACCTGGATCTCCTCAACAACAAGCTGGTCACCTTGCCTGTCAGCTTTGCTCAGCT
CAAGAACCTGAAGTGGTTGGACCTGAAGGATAACCCCCTGGATCCTGTCCTGGCCAAGGTGGCAGGTGACTGCTTGGATG
AGAAGCAGTGTAAGCAGTGTGCAAACAAGGTGTTACAGCACATGAAGGCCGTGCAGGCAGATCAGGAGCGGGAGAGGCAG
CGGCGGCTGGAAGTAGAACGTGAGGCAGAGAAGAAGCGTGAGGCTAAGCAGCGAGCTAAGGAAGCTCAGGAGCGGGAACT
GCGGAAGCGGGAGAAGGCGGAAGAGAAGGAGCGCCGGAGAAAGGAGTATGATGCCCTCAAAGCAGCCAAGCGGGAGCAGG
AGAAGAAACCTAAGAAGGAAGCAAATCAGGCCCCGAAATCTAAGTCTGGCTCCCGTCCCCGCAAGCCACCACCCCGGAAG
CACACTCGTTCCTGGGCTGTGCTGAAGCTGCTGCTGCTGCTGCTGCTATTTGGTGTGGCGGGAGGGCTGGTTGCTTGTCG
GGTGACAGAGCTGCAGCAGCAGCCCCTCTGCACCAGCGTGAACACCATCTATGACAATGCGGTCCAGGGTCTACGCCGCC
ATGAGATCCTCCAGTGGGTCCTCCAGACCGACTCTCAGCAGTGA

Library Parental gene expression (RPM)
bodymap2_adipose 90 .54 RPM
bodymap2_adrenal 79 .42 RPM
bodymap2_brain 42 .33 RPM
bodymap2_breast 58 .95 RPM
bodymap2_colon 63 .40 RPM
bodymap2_heart 25 .94 RPM
bodymap2_kidney 105 .57 RPM
bodymap2_liver 129 .55 RPM
bodymap2_lung 81 .59 RPM
bodymap2_lymph_node 67 .23 RPM
bodymap2_ovary 100 .90 RPM
bodymap2_prostate 52 .38 RPM
bodymap2_skeletal_muscle 40 .27 RPM
bodymap2_testis 70 .02 RPM
bodymap2_thyroid 93 .61 RPM
bodymap2_white_blood_cells 68 .28 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000018827 ortholog_one2many 1 retrogene
retro_cjac_2342,
Equus caballus ENSECAG00000018072 ortholog_one2one 1 retrogene
retro_ecab_240,
Gorilla gorilla ENSGGOG00000006310 ortholog_one2one 1 retrogene
retro_ggor_2346,
Monodelphis domestica ENSMODG00000020901 ortholog_one2one 1 retrogene
retro_mdom_1882,
Nomascus leucogenys ENSNLEG00000009066 ortholog_one2one 1 retrogene
retro_nleu_2629,
Pongo abelii ENSPPYG00000008284 ortholog_one2one 3 retrogenes
retro_pabe_2687, retro_pabe_2874, retro_pabe_2875,
Pan troglodytes ENSPTRG00000009398 ortholog_one2one 1 retrogene
retro_ptro_2985,
Tarsius syrichta ENSTSYG00000000371 ortholog_one2many 1 retrogene
retro_tsyr_25,
Tursiops truncatus ENSTTRG00000000207 ortholog_one2one 1 retrogene
retro_ttru_1931,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3479 76.96 73.62
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Download FASTA sequences of all ENSG00000108829 retrocopies