Parental gene: | KHSRP, ENSG00000088247 |
| Aliases: | KHSRP, FBP2, FUBP2, KSRP |
| Description: | KH-type splicing regulatory protein [Source:HGNC Symbol;Acc:6316] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 19:6413358..6424805(-) |
>ENSG00000088247
ATGTCGGACTACAGCACGGGAGGACCCCCGCCCGGGCCGCCGCCGCCCGCCGGCGGGGGCGGGGGAGCCGGAGGCGCCGG
GGGAGGCCCTCCGCCGGGCCCGCCAGGCGCGGGGGACCGGGGCGGCGGCGGTCCCGGCGGCGGCGGCCCGGGCGGGGGGT
CGGCCGGGGGCCCCTCTCAGCCACCCGGCGGAGGCGGCCCGGGAATCCGCAAGGACGCTTTCGCCGACGCCGTGCAGCGG
GCCCGCCAGATTGCAGCCAAAATTGGAGGCGATGCTGCCACGACAGTGAATAACAGCACTCCTGATTTTGGTTTTGGGGG
CCAAAAGAGACAGTTGGAAGATGGAGATCAACCGGAGAGCAAGAAGCTGGCTTCCCAGGGAGACTCAATCAGTTCTCAAC
TTGGACCCATCCATCCTCCCCCAAGGACTTCAATGACAGAAGAGTACAGGGTCCCAGACGGCATGGTGGGCCTGATCATT
GGCAGAGGAGGTGAACAAATTAACAAAATCCAACAGGATTCAGGCTGCAAAGTACAGATTTCTCCAGACAGCGGTGGCCT
ACCCGAGCGCAGTGTGTCCTTGACAGGAGCCCCAGAATCTGTCCAGAAAGCCAAGATGATGCTGGATGACATTGTGTCTC
GGGGTCGTGGGGGCCCCCCAGGACAGTTCCACGACAACGCCAACGGGGGCCAGAACGGCACCGTGCAGGAGATCATGATC
CCCGCGGGCAAGGCCGGCCTGGTCATTGGCAAGGGCGGGGAGACCATTAAGCAGCTGCAGGAACGCGCTGGAGTGAAGAT
GATCTTAATTCAGGACGGATCTCAGAATACGAATGTGGACAAACCTCTCCGCATCATTGGGGATCCTTACAAAGTGCAGC
AAGCCTGTGAGATGGTGATGGACATCCTCCGGGAACGTGACCAAGGCGGCTTTGGGGACCGGAATGAGTACGGATCTCGG
ATTGGCGGAGGCATCGATGTGCCAGTGCCCAGGCATTCTGTTGGCGTGGTCATTGGCCGGAGTGGAGAGATGATCAAGAA
GATCCAGAATGATGCTGGCGTGCGGATACAGTTCAAGCAAGATGACGGGACAGGGCCCGAGAAGATTGCTCATATAATGG
GGCCCCCAGACAGGTGCGAGCACGCAGCCCGGATCATCAACGACCTCCTCCAGAGCCTCAGGAGTGGTCCCCCAGGTCCT
CCAGGGGGTCCAGGCATGCCCCCGGGGGGCCGAGGCCGAGGAAGAGGCCAAGGCAATTGGGGTCCCCCTGGCGGGGAGAT
GACCTTCTCCATCCCCACTCACAAGTGTGGGCTGGTCATCGGCCGAGGTGGCGAGAATGTGAAAGCCATAAACCAGCAGA
CGGGAGCCTTCGTAGAGATCTCCCGGCAGCTGCCACCCAACGGGGACCCCAACTTCAAGTTGTTCATCATCCGGGGTTCA
CCCCAGCAGATTGACCACGCCAAGCAGCTTATCGAGGAAAAGATCGAGGGTCCTCTCTGCCCAGTTGGACCAGGCCCAGG
TGGCCCAGGCCCTGCTGGCCCAATGGGGCCCTTCAATCCTGGGCCCTTCAACCAGGGGCCACCCGGGGCTCCCCCACATG
CCGGGGGGCCCCCTCCTCACCAGTACCCACCCCAGGGCTGGGGCAATACCTACCCCCAGTGGCAGCCGCCTGCTCCTCAT
GACCCAAGCAAAGCAGCTGCAGCGGCCGCGGACCCCAACGCCGCGTGGGCCGCCTACTACTCACACTACTACCAGCAGCC
CCCGGGCCCCGTCCCCGGCCCCGCACCGGCCCCTGCGGCCCCACCGGCTCAGGGTGAGCCCCCTCAGCCCCCACCCACCG
GCCAGTCGGACTACACTAAGGCCTGGGAAGAGTATTACAAAAAGATCGGCCAGCAGCCCCAGCAGCCCGGAGCACCCCCA
CAGCAGGACTACACGAAGGCTTGGGAGGAGTACTACAAGAAGCAAGCGCAAGTGGCCACCGGAGGGGGTCCAGGAGCTCC
CCCAGGCTCCCAGCCAGACTACAGTGCCGCCTGGGCGGAATATTACAGACAGCAGGCCGCTTACTACGGACAGACCCCAG
GTCCTGGCGGCCCCCAGCCGCCGCCCACGCAGCAGGGACAGCAGCAGGCTCAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_adipose | 123 .96 RPM |
| bodymap2_adrenal | 95 .02 RPM |
| bodymap2_brain | 68 .33 RPM |
| bodymap2_breast | 71 .01 RPM |
| bodymap2_colon | 91 .85 RPM |
| bodymap2_heart | 34 .97 RPM |
| bodymap2_kidney | 53 .69 RPM |
| bodymap2_liver | 37 .28 RPM |
| bodymap2_lung | 71 .18 RPM |
| bodymap2_lymph_node | 80 .00 RPM |
| bodymap2_ovary | 148 .64 RPM |
| bodymap2_prostate | 101 .63 RPM |
| bodymap2_skeletal_muscle | 99 .21 RPM |
| bodymap2_testis | 168 .25 RPM |
| bodymap2_thyroid | 119 .63 RPM |
| bodymap2_white_blood_cells | 85 .46 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000016627 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000005597 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000001952 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000008073 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000010364 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_4142 | 85.30 | 58.23 | Please wait, loading  |
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Download FASTA sequences of all ENSG00000088247 retrocopies