Parental gene:

DNAJC9, ENSFCAG00000004448

Aliases:None
Description:DnaJ (Hsp40) homolog, subfamily C, member 9 [Source:HGNC Symbol;Acc:19123]
Organism:Cat (Felis catus)
Coordinates:D2:36322941..36326747(-)


>ENSFCAG00000004448
GCCATGGGGCTGCTGGAGCTGTGCGAGGAAGTGTTCGGTACTGCCGACCTTTATCGAGTGCTGGGCGTGCGGCGCGAGGC
CTCGGACAGCGAGGTCCGGCGCGGCTACCACAAGGTGTCTCTGCAGGTGCACCCGGACCGGGTCGGCGAGGACGACAAAG
AAGACGCCACCCGCCGTTTCCAGATCCTCGGGAAAGTCTATTCTGTTCTGAGCGACAAAGAGCAGAGAGCACTGTACAAT
GAGCAGGGAACAGTGGACGAAGATTCTGATGTGCTCAACCAAGATCGGGACTGGGAGACGTATTGGAGATTACTTTTTAA
AAAGATATCTCTAGAAGACATTCAAGCTTTTGAAAAGACATACAAAGGTTCTGAAGAAGAGCTGGCAGATATTAAACAGG
CCTATTTGGATTTCAAGGGTGACATGGATCAGATCATGGAGTCTGTACTGTGTGTGCAGTACACAGAGGAACCCAGGATA
AGGAACATTATTCAGCAAGCCATTGATGCTGGAGAGATCCCATCCTATAATGCCTTTGTCAAAGAATCGAAGCAAAAGAT
GAATGCAAGAAAAAGGAGGGCTCAGGAAGAGGCTAAAGAAGCAGAAATGAGCAGGAAGGAGTTGGGCCTTGATGAAGGAG
TAGATAATTTGAAAGCAGTCATTCAGAGCAGACAAAAGGATCGGCAAAAGGAAATGGACAATTTTCTGGCTCAGATGGAA
GCAAAGTACTGCAAACCTTCTAAACGAGGAGGGAAAAAAACGCCTCTCAAGAAAGAAAAGAAATAA

Library Parental gene expression (RPM)
SRP017611_brain 3 .67 RPM
SRP017611_kidney 2 .27 RPM
SRP017611_liver 2 .43 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016933 ortholog_one2one 1 retrogene
retro_amel_478,
Homo sapiens ENSG00000213551 ortholog_one2one 2 retrogenes
retro_hsap_1358, retro_hsap_2448,
Gorilla gorilla ENSGGOG00000015046 ortholog_one2one 3 retrogenes
retro_ggor_1058, retro_ggor_1499, retro_ggor_1524,
Myotis lucifugus ENSMLUG00000004539 ortholog_one2one 3 retrogenes
retro_mluc_699, retro_mluc_700, retro_mluc_955,
Mustela putorius furo ENSMPUG00000003792 ortholog_one2one 1 retrogene
retro_mputfur_727,
Nomascus leucogenys ENSNLEG00000016595 ortholog_one2one 1 retrogene
retro_nleu_1394,
Otolemur garnettii ENSOGAG00000003496 ortholog_one2one 2 retrogenes
retro_ogar_1730, retro_ogar_1740,
Pongo abelii ENSPPYG00000002343 ortholog_one2one 2 retrogenes
retro_pabe_1126, retro_pabe_1799,
Pan troglodytes ENSPTRG00000034219 ortholog_one2one 2 retrogenes
retro_ptro_1414, retro_ptro_931,
Ictidomys tridecemlineatus ENSSTOG00000028067 ortholog_one2one 1 retrogene
retro_itri_413,
Tarsius syrichta ENSTSYG00000011504 ortholog_one2many 1 retrogene
retro_tsyr_39,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_1310 51.68 56.32
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Download FASTA sequences of all ENSFCAG00000004448 retrocopies