Parental gene:

SEPHS1, ENSFCAG00000003921

Aliases:None
Description:selenophosphate synthetase 1 [Source:HGNC Symbol;Acc:19685]
Organism:Cat (Felis catus)
Coordinates:B4:12191624..12220474(-)


>ENSFCAG00000003921
ATGTCTACGCGGGAGTCCTTTAACCCGGAAAGTTATGAATTGGACAAGAGCTTCCGGCTAACCAGATTCACTGAACTCAA
GGGCACTGGCTGCAAAGTGCCCCAAGATGTCCTGCAGAAACTGCTGGAATCCTTACAAGAGAACCACTTCCAAGAAGATG
AGCAATTTCTGGGAGCAGTGATGCCAAGACTTGGCATTGGAATGGATACTTGTGTCATTCCTTTGAGGCACGGCGGTCTT
TCTTTGGTTCAGACCACGGATTACATTTATCCTATCGTCGATGACCCTTACATGATGGGCAGGATAGCATGTGCCAATGT
CCTCAGCGACCTCTACGCGATGGGGGTCACGGAATGTGACAATATGCTGATGCTCCTTGGAATCAGTAATAAGATGACGG
ACAGGGAAAGGGATAAAGTGATGCCCCTAATTATACAGGGTTTTAAAGACGCAGCCGAGGAGGCAGGGACGTCTGTGACG
GGTGGCCAGACGGTGTTAAACCCCTGGATCGTTTTGGGAGGAGTGGCTACCACCGTCTGCCAGCCCAACGAATTTATCAT
GCCAGATAACGCAGTACCGGGGGACGTGCTTGTGCTGACGAAGCCCCTGGGGACGCAGGTGGCCGTGGCCGTGCACCAGT
GGCTGGATATCCCTGAAAAATGGAATAAGATCAAGCTGGTGGTCACCCAAGAAGATGTCGAGTTGGCATACCAGGAGGCA
ATGATGAACATGGCCAGGCTCAACAGAACAGCTGCAGGTCTCATGCACACGTTCAACGCCCACGCTGCCACTGACATCAC
GGGCTTTGGAATTTTGGGCCACGCGCAGAACCTGGCCAAGCAGCAGAGGAATGAGGTGTCCTTTGTGATTCACAACCTTC
CCGTCCTGGCCAAGATGGCTGCCGTGAGCAAGGCCTGTGGAAACATGTTCGGCCTCATGCATGGGACCTGCCCGGAGACA
TCAGGAGGCCTCCTAATCTGTTTACCGAGAGAGCAAGCTGCTCGATTCTGTGCAGAGATAAAGTCTCCCAAATACGGGGA
AGGTCACCAAGCATGGATTATTGGGATCGTAGAGAAGGGCAACCGCACAGCCAGAATCATAGACAAGCCCCGGATCATCG
AAGTCGCACCACAGGCACCAAAGCCGTGA

Library Parental gene expression (RPM)
SRP017611_brain 39 .83 RPM
SRP017611_kidney 27 .41 RPM
SRP017611_liver 27 .19 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000009494 possible_ortholog 2 retrogenes
retro_cjac_166, retro_cjac_2219,
Macropus eugenii ENSMEUG00000012188 ortholog_one2one 1 retrogene
retro_meug_245,
Macaca mulatta ENSMMUG00000021233 possible_ortholog 4 retrogenes
retro_mmul_1607, retro_mmul_2495, retro_mmul_2647, retro_mmul_922,
Mustela putorius furo ENSMPUG00000000948 ortholog_one2one 1 retrogene
retro_mputfur_20,
Nomascus leucogenys ENSNLEG00000012205 possible_ortholog 7 retrogenes
retro_nleu_1868, retro_nleu_2211, retro_nleu_234, retro_nleu_2668, retro_nleu_2873, retro_nleu_3004, retro_nleu_327,
Pongo abelii ENSPPYG00000002099 ortholog_one2one 6 retrogenes
retro_pabe_1324, retro_pabe_1378, retro_pabe_2074, retro_pabe_2620, retro_pabe_3047, retro_pabe_3652,
Rattus norvegicus ENSRNOG00000018125 possible_ortholog 1 retrogene
retro_rnor_59,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_96 82.65 82.98
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Download FASTA sequences of all ENSFCAG00000003921 retrocopies