Parental gene:

NUP62CL, ENSFCAG00000001984

Aliases:None
Description:nucleoporin 62kDa C-terminal like [Source:HGNC Symbol;Acc:25960]
Organism:Cat (Felis catus)
Coordinates:X:86484246..86551790(-)


>ENSFCAG00000001984
GTGGGTTTATTTAATTCTGGAGGAACCGGTACCTGTATAGGTATGTTCACCTTGGGCTCTGCAGATAATAGCACTACTTC
AGCTACAGGGTTTACTTTCTCTACACCTGGTCCAAGAGGGTTTAAGTTTGGGACTCCATCCCAACCAGTTATAAGCCTGT
TCTCATTCAGCAACGCAGCTCCAGCTCCACAGACTAAAGGATTCAGCTTTGGTATACCATTTATATCAACTTCTGCTCCA
GAAGGAACTGAGTTTTCTGTAGGAGTAAATGCACCAAAATTAAACCTGGGCAACACCTGCTTTCAACAACCTCCTGCTTT
CAACAACCTGCAAGTGCTTATAGGGGCTTTGGGGCTGGGTACCAGCACTCTTACTAATTCTTTAACAAGCAGTGTTCCTT
CACACTGGGTGACAGCATCCAGCTTTGTTTTCGGCTCAGCTACCACCTCTGCTGCTCAGTCTGCAACTGCCACAGGGTTC
TTGTTCCTCAGTGGAAAGAAAACTGGGAGGGCCAGTTTCAGTACTGTCTCAGCAATGGAGAATGCAGCTCAACCAATAGC
ATTTGCAGGATTACCCCTCACTCCTACTGCTCAGCATCTCCTTGGTGGAGAGCCTGCAGGAAAGACCTGTTCGGCTTCAG
CATCGACTGCTGACGCCACTACTCGTTCAAGCACCATGCTGTTTACTTCAGTGTCAGATGCTTCTACCTCCACTGTTGCT
TCTGGGTTCTCATTTGTTTCCCCAACAACTTCAAATGGAGCATTTGGTGGTTTAACTTTGGGATTTGGATTCAAATTTCC
TGGAATGGGTGGAGGAGCTCATACTGTATCTACTACAGCATCAACAACGACGACCACCACTGTCACTACTACCACTACGA
CTACCACAACCACCAGTGGCTTTACTTTGAATCTAAGATCACTGGCATCAGCTGGGATTAATAGCATTGTTCCAGTCGGT
ATTAATTCCATACCTTTTACTTCGACTGTTAACAGTGCAATCGTAACTCCTGTGATGACATATGGTCAGCTGGAGGGTCT
GATAAACGAATGGAGCCTTGATTTAGAGGATCAAGAGAGGTACTTTCTTCACCAGGCCACTCAGGTCAATGCTTGGGACC
GTACACTGATTGAGAATGGTGAGAAGATTACAACTTTGCATGGAGAAGTGGAAAAAGTGAAACTGGATCAGAAAAGGCTA
GAACAAGAATTGGATTTTATCCTGTCACAGCAGAAGGAACTAGAAGATCTCTTGACCCCTTTAGAGGAGTTTGTGAAGGA
CCAGAATGGGGCTGCTTATCTGCAGCATGAAGATGCGGAGCCTAGGAAGACTTACAAATTAGCAGAAAATATAGATGCTC
AGCTGAAGCGAATGGCCCAAGATCTCAAGGACATTATTGAAAACCTGAATACATTCGGAAGTCCTGCAGACGTCACTGAC
CGGGTCCAGCAGATCTGCAAAATTCTGAATGCTCATATGGACTTTCTACAGTGGATTAATGAGAATTCAGAAAATGGAAC
ACTAAAGAATAAGTGTGTGAAGAATAAACTAGAAACTCATGAAATAAGAAAATTTCAACAGAGCACTTCTATTAAGCTTA
CCCTG

Library Parental gene expression (RPM)
SRP017611_brain 2 .41 RPM
SRP017611_kidney 0 .31 RPM
SRP017611_liver 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000017963 ortholog_one2one 1 retrogene
retro_cfam_218,
Dasypus novemcinctus ENSDNOG00000001467 ortholog_one2one 1 retrogene
retro_dnov_1108,
Macropus eugenii ENSMEUG00000001005 ortholog_one2many 1 retrogene
retro_meug_1130,
Nomascus leucogenys ENSNLEG00000013865 ortholog_one2one 1 retrogene
retro_nleu_2076,
Pteropus vampyrus ENSPVAG00000001787 ortholog_one2one 1 retrogene
retro_pvam_694,
Vicugna pacos ENSVPAG00000003649 ortholog_one2one 1 retrogene
retro_vpac_448,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_120 60.43 78.57
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Download FASTA sequences of all ENSFCAG00000001984 retrocopies