Parental gene:

PRKAG1, ENSFCAG00000000091

Aliases:None
Description:protein kinase, AMP-activated, gamma 1 non-catalytic subunit [Source:HGNC Symbol;Acc:9385]
Organism:Cat (Felis catus)
Coordinates:B4:78485437..78493634(-)


>ENSFCAG00000000091
CAGGTTGCTTCTTCAGATAGCTCCCCAGCTCTGGAAAATGAGCATTCTTCAGAGACCCCAGAATCCAACAATAGTGTGTA
TACTTCCTTCATGAAGTCTCATCGCTGCTATGACCTGATTCCCACAAGCTCCAAATTGGTTGTATTTGATACTTCCCTGC
AGGTGAAGAAAGCTTTCTTTGCTTTGGTGACTAATGGTGTACGGGCTGCCCCTTTGTGGGATAGTAAGAAGCAAAGTTTT
GTGGGCATGCTGACCATCACCGATTTCATCAATATCCTGCATCGCTACTATAAATCAGCCTTGGTACAGATCTATGAGCT
GGAAGAACACAAGATAGAAACTTGGAGAGAGGTGTACCTACAGGACTCCTTCAAACCACTTGTCTGCATTTCTCCTAATG
CCAGCTTGTTTGATGCTGTCTCTTCATTAATTCGAAACAAGATCCACAGGCTGCCAGTTATTGACCCAGAATCAGGCAAC
ACCTTGTACATCCTTACCCACAAGCGTATCCTCAAGTTCCTCAAACTGTTTATCACTGAGTTCCCCAAGCCAGAGTTCAT
GTCTAAGTCTCTGGAAGAGCTACAGATTGGCACCTATGCTAACATTGCTATGGTCCGCACCACCACCCCTGTCTACGTGG
CTCTGGGCATCTTTGTACAACACCGAGTTTCAGCACTGCCAGTAGTAGACGAGAAAGGGCGTGTGGTGGACATCTACTCC
AAGTTTGATGTTATCAATCTGGCAGCAGAAAAGACCTACAACAACTTAGATGTGTCTGTGACGAAAGCCCTCCAACATCG
ATCACATTACTTTGAGGGTGTCCTCAAGTGTTACCTGCATGAGACTCTGGAGACCATCATCAACAGGCTGGTGGAAGCAG
AGGTTCACCGACTTGTAGTGGTAGATGAGAATGATGTGGTCAAGGGGATTGTATCACTGTCTGACATCCTGCAGGCCCTG
GTGCTCACAGGAGGAGAGAAGCCCTGA

Library Parental gene expression (RPM)
SRP017611_brain 48 .20 RPM
SRP017611_kidney 33 .70 RPM
SRP017611_liver 20 .12 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006964 ortholog_one2one 2 retrogenes
retro_amel_1722, retro_amel_406,
Choloepus hoffmanni ENSCHOG00000006397 ortholog_one2many 1 retrogene
retro_chof_32,
Callithrix jacchus ENSCJAG00000020827 ortholog_one2one 2 retrogenes
retro_cjac_3045, retro_cjac_3892,
Felis catus ENSFCAG00000003842 within_species_paralog 2 retrogenes
retro_fcat_237, retro_fcat_240,
Myotis lucifugus ENSMLUG00000011156 ortholog_one2one 2 retrogenes
retro_mluc_2417, retro_mluc_451,
Oryctolagus cuniculus ENSOCUG00000008409 ortholog_one2one 1 retrogene
retro_ocun_829,
Sus scrofa ENSSSCG00000000185 ortholog_one2one 1 retrogene
retro_sscr_210,
Tursiops truncatus ENSTTRG00000004730 ortholog_one2one 1 retrogene
retro_ttru_497,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_1730 68.97 69.82
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Download FASTA sequences of all ENSFCAG00000000091 retrocopies