Parental gene:

HOMER2, ENSECAG00000023619

Aliases:None
Description:homer homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:17513]
Organism:Horse (Equus caballus)
Coordinates:1:91787242..91827989(+)


>ENSECAG00000023619
AGAGAACAGCCCATCTTCACCACCCGAGCACATGTCTTCCAGATTGACCCCAACACCAAGAAGAACTGGGTGCCTGCGAG
CAAGCAGGCCGTCACGGTGTCCTACTTCTATGATGTCACCAGGAACAGCTATCGGATCATCAGTGTGGACGGAGCCAAGG
TGATCATAAACAGCACAATCACACCCAATATGACTTTCACCAAAACGTCGCAGAAGTTCGGGCAGTGGGCTGACAGCAGA
GCCAACACCGTGTTCGGTTTGGGGTTTTCCTCGGAGCAGCAGCTGACAAAGTTTGCAGAGAAATTCCTAGAAGTGAAAGA
AGCTGCCAGACTAGCCAGAGACAAGTCCCAGGAGAAAATCGAGACCTCGAGTAATCATTCCCAAGAATCTGGGCGTGAAA
CCCCATCTTCCACTCAGGCATCCAGTATCAATGGGACGGACGATGAGAAGGCCTCTCATGCGGGTCCTGCTGACACACAC
CTGAAGTCTGAGAATGACAAGCTGAAGATCGCTTTGACACAGAGCGCCGCCAACGTGAAGAAGTGGGAGGTGGAGCTGCA
GACGCTGCGGGAGAGCAACGCGCGGCTGACGGCGGCGCTGCAGGAGTCGGCGGCCAGCGCGGAGCAGTGGAAGAGGCAGT
TCTCCGTCTGCCGCGACGAGAACGACCGGCTCCGGCACAAGATTGACGAGCTGGAAGAACAATGCAGTGAGATAAACAGA
GAGAAGGAGAAAAATACCCAGTTGAAGAGAAGAATTGAGGAGCTGGAATCGGAACTCCGAGAAAAGGAGACGGAGTTGAA
AGACCTCCGAAAACAAAGTGAAATCATACCTCAGCTCATGTCAGAGTGTGAATACGTCTCGGAAAAGTTAGAGGCGGCAG
AGAGAGACAATCAAAACCTGGAGGACAAGGTGCGTTCTCTCAAGACCGACATTGAGGAGAGTAAATACCGACAGCGCCAC
CTGAAGGTGGAGCTCAAGAACTTCCTGGAGGTGCTGGACGGCAAGATTGACGACCTGCACGACTTCCGCCGCGGCCTCTC
CAAGCTGGGCACGGACAACTAG

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 1 .95 RPM
SRP021940_cerebellum 11 .74 RPM
SRP021940_embryo 11 .97 RPM
SRP021940_placental_villous 1 .35 RPM
SRP021940_synovial_membrane 1 .87 RPM
SRP021940_testis 11 .57 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000015884 ortholog_one2many 3 retrogenes
retro_cjac_3556, retro_cjac_3614, retro_cjac_3871,
Cavia porcellus ENSCPOG00000014688 ortholog_one2many 1 retrogene
retro_cpor_35,
Homo sapiens ENSG00000103942 ortholog_one2one 1 retrogene
retro_hsap_1468,
Macaca mulatta ENSMMUG00000008297 ortholog_one2many 1 retrogene
retro_mmul_2278,
Nomascus leucogenys ENSNLEG00000010953 ortholog_one2one 1 retrogene
retro_nleu_3002,
Pongo abelii ENSPPYG00000006735 ortholog_one2one 5 retrogenes
retro_pabe_1209, retro_pabe_1210, retro_pabe_1217, retro_pabe_3566, retro_pabe_3568,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_661 59.02 51.84
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2. retro_ecab_692 70.65 51.84
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3. retro_ecab_1046 70.65 51.84
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Download FASTA sequences of all ENSECAG00000023619 retrocopies