Parental gene:

EFCAB2, ENSECAG00000022403

Aliases:None
Description:EF-hand calcium binding domain 2 [Source:HGNC Symbol;Acc:28166]
Organism:Horse (Equus caballus)
Coordinates:14:1100520..1155591(+)


>ENSECAG00000022403
GAGATAGCAGTAGCAGAATTTCACAAAAAAATCAAAGAGGCTTTTGAAGTTTTTGACCATGAGTCGAATAATACAGTGGA
TGTGAGGGAGATCGGAACAATCATCAGGTCATTAGGATGCTGCCCTAGCGAAGGAGAGCTGCATGACCTGATTGCAGAGG
TAGAGGAAGAAGAACCCACTGGATACATTCGATATGAAAAATTTCTTCCAGTGATGACCCAAGTACTGCTGGAGAGAAGG
TACAGACCAATTCCAGAAGATATCCTTCTTCGAGCTTTTGAGGTCTTAGATCCAGCTAAACGTGGGTTTCTTTCTAAGGA
AGAACTGATCAAGTATATGACTGAAGAA

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 0 .18 RPM
SRP021940_cerebellum 1 .35 RPM
SRP021940_embryo 0 .74 RPM
SRP021940_placental_villous 0 .05 RPM
SRP021940_synovial_membrane 0 .05 RPM
SRP021940_testis 1 .53 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000029154 ortholog_one2one 1 retrogene
retro_cfam_781,
Callithrix jacchus ENSCJAG00000016907 ortholog_one2one 1 retrogene
retro_cjac_3944,
Equus caballus ENSECAG00000000796 within_species_paralog 1 retrogene
retro_ecab_49,
Oryctolagus cuniculus ENSOCUG00000029593 ortholog_one2one 1 retrogene
retro_ocun_612,
Tarsius syrichta ENSTSYG00000006254 ortholog_one2one 2 retrogenes
retro_tsyr_1584, retro_tsyr_317,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_874 70.79 76.72
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Download FASTA sequences of all ENSECAG00000022403 retrocopies