Parental gene:

ENSECAG00000021667

Aliases:None
Description:None
Organism:Horse (Equus caballus)
Coordinates:7:46095112..46098087(-)


>ENSECAG00000021667
GACTCGGTGGCCATTGAGGATGTGACTGTGAGCTTCACTCTGGAGGAGTGGGCTTTACTGGATCCTTCACAGAAGAAACT
CTACAGAGATGTGATGTGGGAAACCTTCAGGAACCTGGCCTCAGTAGGGAAAACATGGGAAGATCATGATATTGAAGAAA
AGTATCAAAAGCAGGAGAGAAAACTAAGAAGTCATATGGTAGAGAGACTCTGTGAAAGTGAAGAGGGTGGTCAATGTGGA
GAAAACTTCAGCCTTCTTCCCAATCTCAAACTGAAAAAGAAACCTACTGCAGCAAAACCGTATAAATGCAGTGCATGTGG
AAAAGTCTTCATGCATCATTCATCCCTTAATAGGCATGTTAGATGTCACAATGAACACAGACCACATGCCTATCAAAAAT
GTGCTGAGAAGCCATATAAATGTAAGGAATGTGGGAAAGCCTTCCCTTTTCCCAGTTCTCTTCAAATACATGAAAGAACT
CATACTGGAGAGAAACCCTATGAATGTAAAAATTGTGGTAAAGCATTCATTTCTTCCAAGTCTCTTCGAATACACGAAAG
AATTCATACTGGAGAGAAACCCTATGAATGTAAGGAATGTGGGAAAGCCTTTACAGCTCCCTCAAGCCTTCGGTCACACA
TGATCTCTCACACTGGAGATGGACCTTATAAATGCAAGGAATGTAGGAAAGTATTCATTTCTCCCAGTGCTTTTCGAATA
CATGAAAGGAGTCACACTGGAGAGAAACCCTATGAATGTAAAAATTGTGGTAAAGCATTCACTTCTTCCAAGTCTCTTCG
AATACATGAAAGAATTCATACGGGAGAGAAACCCTATGAATGTAAGGAATGTGGGAAAGCCTTTACAGCTCCCTCAAGTC
TTCGCTTACACATGATCTCTCACACTGGAGATGGACCTTATAAATGTAAGGAATGTAAGAAAGTATTCATTTCTCCCAGT
GCTTTTCAGATACATGAAAGGAGTCACACTGGAGAGAAACCCTATGAATGTAAATATTGTGGTAAAGCATTCATTTCTTC
CAGTTCATTTCAAATACATGAAAGGAGTCACACTGGAGAGAAACCCTATGAATGTAAAGAATGTGGGAAAGCCTTCAGTT
TGTACGCTAACTTAAAAAAACACCAAAAAACTCACACAGGACGGACACCCTTTGTATGTAAGGAATGTAGTAAGGCTTTT
ATTTCACTTCAAGCTTTCCAAATACATGAAAGAAATCACACTAGTGAGAAATTCTATGAATGTAAAAAATGCAATAAAGC
ACTCACTTCTTACAGTTCTTTTCGAAGACATGAAAGAAATCACACTAGAGAGAAACCCTATGAATGTAAGAAATGCAGTA
AGACATTCGCTTATCCCAGTTCTCTTCGAGTACATGAAATAACTCACACTGGAGAGAAACCCTATGAATGTAAGGAATGT
GGGAAAGCCTTTAGAGATCCCTCAAGCCTTCGATCACACATGATCTCTCACACTGGAGATAGACCTTATAAATGTAAGGA
ATGTGAGAAAGCATTTATTTCCCCCAGTGCCTTTCGAGTACATAAAAGGAGTCACACTGGAGAGAAACCCTATGAATGTA
AAGAATGTGGTAAAGCATTCAGTTGTAGCAGTTCTCTTCGAGTACATGAAAGAATTCATATTGGAGAGAAACCCTATGAA
TGTAAAGAATGCTGTAAATCATTCAGTCGCACCAGTTCTCTTCGAGTACATGAAAGAGTTCATACAGGAGAGAAACCCTA
TGAATGTAAGGAATGCAGTAAAGCCTTCACTTCTTCCAGTTCTCTTCGAGGACATGAAAGAGTTCATACAGGAGAGAAAC
CCTATGAATGTGAAAAATGCAATAAAGCCTTCATTTCTTCCAGTTCTCTTCGAGGACATGAAAGAGTTCATACGGGAGAG
AAACCCTATGAATGTAAGGAATGTAGGAAAGCCTTCAGTTCTCATCAAAATTTCCAAATACATAAAAGAAATCATACTGG
AGAGAAACTGTATGAATGTGAAAAATGTCATAAAGCATTTAGTTTTCCCAGTTCTCTTCGAAGACATGAAAGAACTCATA
TTGAAGAGAAACCCTGTGAATGTCAGGAAGGTGGGAAAGCCTTT

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 0 .77 RPM
SRP021940_cerebellum 0 .21 RPM
SRP021940_embryo 1 .76 RPM
SRP021940_placental_villous 0 .96 RPM
SRP021940_synovial_membrane 0 .66 RPM
SRP021940_testis 0 .38 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000008838 possible_ortholog 1 retrogene
retro_acar_51,
Anolis carolinensis ENSACAG00000023302 possible_ortholog 2 retrogenes
retro_acar_3, retro_acar_34,
Anolis carolinensis ENSACAG00000026389 possible_ortholog 2 retrogenes
retro_acar_13, retro_acar_4,
Anolis carolinensis ENSACAG00000026721 possible_ortholog 1 retrogene
retro_acar_23,
Anolis carolinensis ENSACAG00000026996 possible_ortholog 1 retrogene
retro_acar_22,
Anolis carolinensis ENSACAG00000027062 possible_ortholog 1 retrogene
retro_acar_29,
Ciona savignyi ENSCSAVG00000007589 ortholog_many2many 2 retrogenes
retro_csav_30, retro_csav_31,
Equus caballus ENSECAG00000010608 within_species_paralog 1 retrogene
retro_ecab_68,
Equus caballus ENSECAG00000023688 other_paralog 1 retrogene
retro_ecab_75,
Macaca mulatta ENSMMUG00000013571 ortholog_one2many 1 retrogene
retro_mmul_248,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_560 60.00 54.38
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSECAG00000021667 retrocopies