Parental gene:

ENSECAG00000010608

Aliases:None
Description:None
Organism:Horse (Equus caballus)
Coordinates:7:47096679..47149578(+)


>ENSECAG00000010608
AAATGTAAGGAATGTGGGAAAGCCTTCCCTTTTCCAAGTGCTCTTCAAAGACATGAAAGGACACATATTGGAGAGAAACC
CTATAAATGTAAAAAATGCAATAAAGCCTTCACTTCTTCCAGTTCTCTTCAAGTACATGAAAGAAATCACACTGGAAAGA
AACCTTATGAATGTAAAAAATGCGGTAAAGCATTTCATTTTCCCAGTTCTCTTCGAAGTCATGAAACTATTCATACTGGA
GAGAAACCCTATGAATGTAAAAAATGCAGTAAAGAATTCATTTTTTTGAGTTCTCTTCGAAGACATGAAAGAATTCATAC
TGGAGAGAGACCCTATGAATGTAAAAAATGCAGTAAAGCATTCTGTTATCCCAGTTCTCTTCAGATACATGAAAGAATTC
ATACTGGGGAGAAACCCTATGAATGTAAAAAATGCAGTAAAGCATTCACATTTCCCAGTGCGTTTCAAAGACATGAAAGC
ACTCACATTAGAGAGAAACCCCATGAATGTAAAAACTGCAGTAAAACATTCAGTTCTTCCCGTGCTCTTCAAATACATGA
CAGAACTCATTCTGGAGAGAAAATTTATGAATGTAAAAAATGCAGTAAGGCCTTCACATCTCCTAGTGCTCTTCGATTAC
ATGAAAGAATTCATACTGGGGAGAAACCGTATGAATGTAAAAAATGCAGTAAAGCATTCACTTTTTCTGCTTCCCTTCGA
AAACATGAAAGAACTCATACTAGAGAGAAACCCTATGAATACAATATTTTAGGCAAGAAAGCCCTCCGTTTTCCCAGTTC
TCTTCAAATATATGAAAGAACCTGTACTGGAGAGAAACCCTATAAATGTCAAAATTGCAGTAAAGCATTCACTTCTTCCA
GTTCTCTTCGAGTCCATGAAAGAATTCATACAGGAGAGAAACCTTATGAATGTAAGGAATGTGGGAAAGCCTTTAGAGCT
CTGGCAAGCCTTCAGTCACACATGATCTTTCACACTGGAGATGGACCGTATAAATGTAAGGAATGTGAGAAAGCATTCCT
TTCTCCCAGTTTACTTGAAATACATGAAAGGAGACACACTGGAGAGAAACCCTATGAATGTAAATATTGTAGTAAAGCAT
TTAGTCTTCCCAGTGTTCTTGAAATACATGAAAGAACTCACACTGGAGAGAAACCGTATCAATGTAAGGAATGTGGGAAA
GCTTTTATTGCTCTCACAAACCTTCGAGTACACATGGTCACTCACACTGGAGATGGACCTTATAAATGTAAGGAATGTGG
GAAAGTATTCATTTATCCCAGTTTATTTCAAAGACATGAAAGGAGTCACACTGGAGAGAAACCCTATGAATGTAAAGAAT
GTGGGAAAGTTTTCAGTTTGTATGCTTACTTAGAAAAACACAAAAGAACTCACACAGGAGGGACACCCTATGTATGTAAG
GAATGTGGCAAGGCAATTATTTCTCTCAAACTTTTCCAAATACATGAAAGGAGTCACACAAGAGAGAAATCCTATGAATG
TAAAAAATGCAATAAAGCATTCACTTGTCCTAGTTCTCTTCGAGTACATGGAAGAACTCACACTGGAGAGAAACCCTATG
AATGTAAGGAATGCGGGAAAGCCTTCAGAGCTCGCTCAAGCCTTCGATCACATGTGATGCTTCACACTGGAGATGGACCT
TATAAATGTAAGGAATGTGGGAAAGCATTCATTTCTCCCAGTTCACTTCAAAGACATGAAAGGAGTCACACTGAAGAGAA
ACCCTATGAATGTAAAAAATGCAGTAAAGCCTTCAGTTATCCCTATTCTCTTCGAGTCCATGAAAGAACTCATACTGGAG
AGAAACCCTATGAATGTAAGGAATGTGGGAAAGCCTTTATAGCTCTCACAAACCTTCAATCGCACATGATGCGTCACACT
GGAGATGGACCTTATAAATGTAAGGAATGTGAGAAAGCATTCATTTCTCCCAGTTTACTTCAAATACATGGAAGGAGTCA
CACTGGAGAGAAACCATATGAATGTAAAGAATGCAGTAAAACTTTCAGTTATATTGGTTCTCTTCAAAAACACGAACGAA
CTCATACTGGAGAGAAACCTTATGAATGTAAAAAATGTAGTAAAGCATTTGATGTTGTCAGTTCTCTTCGAAGGCATGAA
AGAACTCATACTAGTGAGAAAGCC

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 1 .12 RPM
SRP021940_cerebellum 1 .51 RPM
SRP021940_embryo 2 .07 RPM
SRP021940_placental_villous 0 .87 RPM
SRP021940_synovial_membrane 0 .63 RPM
SRP021940_testis 1 .92 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000008838 possible_ortholog 1 retrogene
retro_acar_51,
Anolis carolinensis ENSACAG00000023302 possible_ortholog 2 retrogenes
retro_acar_3, retro_acar_34,
Anolis carolinensis ENSACAG00000026389 possible_ortholog 2 retrogenes
retro_acar_13, retro_acar_4,
Anolis carolinensis ENSACAG00000026721 possible_ortholog 1 retrogene
retro_acar_23,
Anolis carolinensis ENSACAG00000026996 possible_ortholog 1 retrogene
retro_acar_22,
Anolis carolinensis ENSACAG00000027062 possible_ortholog 1 retrogene
retro_acar_29,
Ciona savignyi ENSCSAVG00000007589 ortholog_many2many 2 retrogenes
retro_csav_30, retro_csav_31,
Equus caballus ENSECAG00000021667 within_species_paralog 1 retrogene
retro_ecab_560,
Equus caballus ENSECAG00000023688 other_paralog 1 retrogene
retro_ecab_75,
Macaca mulatta ENSMMUG00000013571 ortholog_one2many 1 retrogene
retro_mmul_248,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_68 52.88 90.66
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSECAG00000010608 retrocopies