Parental gene:

TMEM106C, ENSECAG00000020351

Aliases:None
Description:transmembrane protein 106C [Source:HGNC Symbol;Acc:28775]
Organism:Horse (Equus caballus)
Coordinates:6:65620532..65624749(+)


>ENSECAG00000020351
ATGGGGTCCCAGCATTCCGCCTCTGCTCGCCCCTCTTCCTGCAGGCGAAAGAAAGATGACAGGGAGGATTTTCTGGCTGA
ACGGGAGCAGGAAGAAGCCATCGCTCAGTTTCCGTATGTGGAGTTCACCGGTCGAGATAGCATCACCTGTCTCACGTGCC
AAGGGACCGGCTACATTCCAACAGAGCAAGTAAATGAATTGGTGGCTTTGATCCCACACAGTGATCAGAGGTTGCGCCCT
CAGAGAACTAAGCAATATGTACTCCTGTCTGTCTTGCTGTGTCTCCTGGCATCTGGGTTGGTGGTTTTCTTCCTCTTTCC
ACATTCAGTCCTTGTGGATGACGACGGCATCAAAGTGGTGAAAGTCACGTTTAATAAGCAGGACTCCCTGGTGATCCTCG
CCATCACGGCCACCCTGAAAATCAGGAACTCCAACTTCTACTCTGTGGCCGTGACCAGCCTGTCCACCCAGGTTCAGTAC
ATGAACACCGTGGTTGGGTCATATGTGACAGCAAATGTCTCCCTTATTCCACCTCGGAGCGAGCACCTGGTGAATTTTAC
TGTGAAGGCTGAGATGGGAGGACCGTATTCCTATGTGTACTTCTTCTGCACATTGCCGGATATCCTGATTCACAACATAG
TGATCTTCATGCGAACTTCAGTGAAGATTTCATACATTGGCCATGTGACCCAGAGCTCCTTGGAGACCCATCACTATGTG
GATTGTGGAGCAAATTCTACAGCTGTTTAG

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 0 .00 RPM
SRP021940_cerebellum 0 .16 RPM
SRP021940_embryo 32 .61 RPM
SRP021940_placental_villous 23 .77 RPM
SRP021940_synovial_membrane 18 .53 RPM
SRP021940_testis 24 .62 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000008335 ortholog_one2one 1 retrogene
retro_cpor_1124,
Echinops telfairi ENSETEG00000010370 ortholog_one2one 1 retrogene
retro_etel_173,
Myotis lucifugus ENSMLUG00000017734 ortholog_one2one 1 retrogene
retro_mluc_1096,
Pteropus vampyrus ENSPVAG00000014352 ortholog_one2one 1 retrogene
retro_pvam_562,
Sus scrofa ENSSSCG00000028397 ortholog_one2many 1 retrogene
retro_sscr_473,
Tarsius syrichta ENSTSYG00000001184 ortholog_one2many 1 retrogene
retro_tsyr_1263,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_660 69.92 93.98
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Download FASTA sequences of all ENSECAG00000020351 retrocopies