Parental gene:

ENSECAG00000015200

Aliases:None
Description:None
Organism:Horse (Equus caballus)
Coordinates:10:27069095..27071004(-)


>ENSECAG00000015200
ATGGCTTTAGATCTCAGAATCTCATTTCAAGGTGAACCATCCAGGAATGATCCTGGGTCAGAAAATCATGAGTTTAATCC
CCGTCAAGTACCTGCTGTCCAGGATGGGGAGAGGATCTCCAAGTTCCCGAGCACTCAACACAGCTTATTTCAAAATGGCA
AGAATTCATGTGCAAGGCAGGAACTGCAAAGACTCTATAAGTTATTTCACTCCTGGCTACAGCCAGAAAAACACAGCAAG
GATGAAATGATTTCTCGTTTGGTCCTGGAGCAATTTATGATCAATGGCTACTGCAGTGACAGGTCCATGTTGAAAGAGAA
ATGGGAATCAAGTGGCAGAAACCTGGAGAAATTCATGGAAGATCTGACTGATGATGGCATGAAGCCACCTGGCTTAGTCC
ACGTCTGCATGCAGGGGCAGGAAGCTCTCTTTTCTGAGAATATGCCCTTAAGAGAAGTCATAGTTCACCTCAGGAAACAG
TTCTCAACAGGAACCCAAACTGGAGAGAACATGGGGACCCCTTTCCAGACTCCCAAAGATCATTCTCTGGAAACAGAACA
AGGAGATGAAGACAAAGAAAATGGTGGCAACATATCTTTGAAAACTTGTCAAGTAAATGACAGTATGACTAGTCAAGGCA
ATCAAACACCTTCCCTACTCATCATCCAGGGAGAGAACCGTCCTGGGCCTGGAGAGGGAGGTGTTCCTTTGGAGAATCCA
CTCAGCTCCAGAAGAGCAGGTCTAGGCAGCTGCAGGTCCCAGGAAGAGTCCCTGAAAGGACCCCCTTATCAAGATGTCCT
TATAGAGGTGAGACCAGGGTTTCTCTCCCGGCCAAACCAGGTTACGCCTGAGCGTGTTCCTACCCACCAGAGCATTGAGG
GAAACTCAGCATGTGGGGGACACCAAGAAAGATCCCAGGGAGCCCCCAAATCATACAAATGTGAGAAGTGTCCCAGGATC
TTTAGGTATCTGTCTCGGTTAAAAGCCCATCAAAGAAGACACAATAATGAGAGGACATTTATTTGTGGCCAGTGTGACAA
AGGCTTCTTCCAGGCATCAGACCTACGCATGCATCAGAAGATTCACACAGGAGAGAAACCTTTCAAGTGCAGCACATGTG
AAATGTCCTTCAGCCACAAAACCAACCTTCGGGCTCATGAGAGAATCCACACAGGGGAGAAGCCCTATGTGTGTTCCCTT
TGCCAGAGAAGCTACCGCCAGTCATCCACCTACCACCGCCACCTGAGGACTCACCAGAAAATTGCCTTCAAAAGTGTTCC
CTCT

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 0 .00 RPM
SRP021940_cerebellum 0 .00 RPM
SRP021940_embryo 0 .03 RPM
SRP021940_placental_villous 0 .00 RPM
SRP021940_synovial_membrane 0 .00 RPM
SRP021940_testis 0 .06 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000005419 ortholog_one2many 2 retrogenes
retro_cpor_1470, retro_cpor_285,
Dasypus novemcinctus ENSDNOG00000011483 ortholog_one2many 11 retrogenes
retro_dnov_1048, retro_dnov_1253, retro_dnov_1287, retro_dnov_1505, retro_dnov_174, retro_dnov_1780, retro_dnov_2499, retro_dnov_2556, retro_dnov_2666, retro_dnov_859, retro_dnov_964,
Loxodonta africana ENSLAFG00000003257 ortholog_many2many 1 retrogene
retro_lafr_171,
Ictidomys tridecemlineatus ENSSTOG00000023779 ortholog_one2many 1 retrogene
retro_itri_408,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_78 93.22 100.00
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Download FASTA sequences of all ENSECAG00000015200 retrocopies