Parental gene:

SPPL3, ENSDNOG00000016589

Aliases:None
Description:signal peptide peptidase like 3 [Source:HGNC Symbol;Acc:30424]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_4665:35773..106085(-)


>ENSDNOG00000016589
GTGGAGCAGACCTACTCTTGGGCCTATTCCCTGGTTGATTCCAGCCAAGTATCTACATTTCTGATTTCCATTCTACTTAT
AGTCTATGGTAGTTTCAGGTCCCTTAATATGGACTTTGAAAATCAAGATAAGGAGAAAGATAGCAACAGTTCTTCTGGGT
CTTTCAATGGCAACAGCACCAATAATAGTATCCAGACTATCGACTCTACCCAGGCCCTTTTCCTTCCAATTGGAGCATCT
GTCTCTCTTCTAGTAATGTTCTTCTTCTTTGACTCAGTTCAAGTAGTTTTTACAATATGTACAGCAGTTCTTGCAACGAT
AGCTTTTGCTTTTCTTCTTCTCCCAATGTGCCAATATTTAACAAGACCCTGTTCACCTCAGAACAAGATATCTTTTGGTT
GCTGTGGGCGTTTCACTGCTGCTGAGTTACTGTCATTCTCTCTGTCTGTCATGCTCGTCCTCATATGGGTTCTCACTGGC
CATTGGCTTCTCATGGATGCTCTGGCCATGGGTCTCTGTGTCGCAATGATAGCCTTCGTCCGCCTGCCAAGCCTCAAGGT
CTCCTGCCTGCTTCTCTCAGGACTTCTAATCTATGACGTCTTTTGGGTGTTTTTCTCAGCCTACATCTTCAATAGCAATG
TCATGGTGAAGGTGGCCACACAGCCGGCTGACAATCCCCTTGATGTTCTATCCCGGAAGCTCCACCTGGGGCCCAATGTT
GGGCGTGATGTTCCTCGCCTGTCTCTGCCTGGAAAACTGGTCTTCCCAAGCTCCACAGGCAGTCACTTCTCTATGTTGGG
CATTGGAGACATTGTGATGCCCGGTCTCCTCTTGTGCTTTGTCCTTCGTTATGACAACTACAAAAAACAAGCCAGTGGTG
ACTCCTGTGGTGCCTCTGGACCTGCCAACATCTCTGGGCGCATGCAGAAGGTCTCCTACTTCCACTGCACCCTCATTGGA
TATTTTGTAGGTCTGCTAAAAAGTACTGTGGCGTCTCGCATTCACCGAGCAGCCCAGCCNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTGCCACTCCTCACAATGGCCTATTTAGGTGACTTACGGCGGATGTGGTCTGAACCATTCCACTCCAAGT
CCAGCAGCTCCCGATTCTTGGAAGTATGA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 19 .84 RPM
SRP012922_cerebellum 14 .43 RPM
SRP012922_heart 5 .34 RPM
SRP012922_kidney 9 .58 RPM
SRP012922_liver 5 .42 RPM
SRP012922_lung 13 .75 RPM
SRP012922_quadricep_muscle 4 .33 RPM
SRP012922_spleen 19 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000157837 ortholog_one2one 1 retrogene
retro_hsap_1898,
Gorilla gorilla ENSGGOG00000016245 ortholog_one2one 1 retrogene
retro_ggor_1392,
Myotis lucifugus ENSMLUG00000012754 ortholog_one2one 1 retrogene
retro_mluc_672,
Macaca mulatta ENSMMUG00000020650 ortholog_one2one 1 retrogene
retro_mmul_1359,
Pongo abelii ENSPPYG00000005041 ortholog_one2one 2 retrogenes
retro_pabe_1578, retro_pabe_1579,
Pan troglodytes ENSPTRG00000005548 ortholog_one2one 1 retrogene
retro_ptro_1275,
Rattus norvegicus ENSRNOG00000001178 ortholog_one2one 1 retrogene
retro_rnor_2157,
Sarcophilus harrisii ENSSHAG00000015326 ortholog_one2one 1 retrogene
retro_shar_660,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_175 75.71 54.45
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Download FASTA sequences of all ENSDNOG00000016589 retrocopies